RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 CYP39A1Q9NYL5 469 aa9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 ADD3Q9UEY8 706 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 CTNNA3Q9UI47 895 aa9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 ELP1O95163 1332 aa9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 FRMPD2Q68DX3 1309 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 LAMA2P24043 3122 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-242ENST00000524292 TRIM43BA6NCK2 446 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 PDHBP11177 359 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 TNFAIP2Q03169 654 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 ZNF543Q08ER8 600 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 IMMTQ16891 758 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 MUM1L1Q5H9M0 696 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 GPATCH4Q5T3I0 446 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 SH3RF1Q7Z6J0 888 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 TRIM43Q96BQ3 446 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 TOX2Q96NM4 488 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 DSCC1Q9BVC3 393 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 AP5M1Q9H0R1 490 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 NEDD4P46934 1319 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 MCM3APO60318 1980 aa9.97□□□□□ -0.81
CTNNA1-242ENST00000524292 LOC102724159A0A0B4J2E5 919 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 A0A0U1RQG5 324 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 PTPDC1A2A3K4 754 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 MYADML2A6NDP7 307 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 KIAA0355O15063 1070 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 TLR3O15455 904 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 ADCY6O43306 1168 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 ZEB2O60315 1214 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 ASGR1P07306 291 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 FPGSQ05932 587 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 PWP2Q15269 919 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 CCSAPQ6IQ19 270 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 TTBK2Q6IQ55 1244 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 Q7L0L9 218 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 TLK2Q86UE8 772 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 DGKHQ86XP1 1220 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 KATNBL1Q9H079 304 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 KAT14Q9H8E8 782 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 CNNM2Q9H8M5 875 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 VTA1Q9NP79 307 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 WDR19Q8NEZ3 1342 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 COL6A3P12111 3177 aa9.96□□□□□ -0.82
CTNNA1-242ENST00000524292 B4DLN1 442 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 NFIBO00712 420 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 KDM4AO75164 1064 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 CABYRO75952 493 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 SNHG28P0DPA3 235 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 MRPL12P52815 198 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 NKX3-2P78367 333 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 BAATQ14032 418 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 SHHQ15465 462 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 FSCN1Q16658 493 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 ZNF697Q5TEC3 545 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 IQSEC1Q6DN90 963 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 FAM109BQ6ICB4 259 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 FBXO16Q8IX29 292 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 RNPC3Q96LT9 517 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 UBAC1Q9BSL1 405 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 KRT23Q9C075 422 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 MTMR10Q9NXD2 777 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 STXBP5LQ9Y2K9 1186 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 SUPT16HQ9Y5B9 1047 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 LAMA4Q16363 1823 aa9.95□□□□□ -0.82
CTNNA1-242ENST00000524292 ASTN1O14525 1302 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 RAD50Q92878 1312 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 B4E1Z4 1266 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 ARVCFO00192 962 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 DYNC1LI2O43237 492 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 OATP04181 439 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 FECHP22830 423 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 DNAJB2P25686 324 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 CALML3P27482 149 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 ALDH5A1P51649 535 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 SMAD3P84022 425 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 BEX3Q00994 111 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 FAAP100Q0VG06 881 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 ASPRV1Q53RT3 343 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 RNF207Q6ZRF8 634 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 SLC17A8Q8NDX2 589 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 MORC4Q8TE76 937 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 SEZ6LQ9BYH1 1024 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 TSR3Q9UJK0 312 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 GNEQ9Y223 722 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 Q9Y3F1 56 aa9.94□□□□□ -0.82
CTNNA1-242ENST00000524292 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TNKSO95271 1327 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 DHX16O60231 1041 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 TIMP1P01033 207 aa9.93□□□□□ -0.82
CTNNA1-242ENST00000524292 GOLGA8HP0CJ92 632 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms