RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 EEPD1Q7L9B9 569 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 RPAINQ86UA6 219 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 FAM133AQ8N9E0 248 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 HAUS7Q99871 368 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 RIOK1Q9BRS2 568 aaKnown RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 NSUN3Q9H649 340 aaKnown RBP11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 COL4A6Q14031 1691 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 ATRXP46100 2492 aa11.8□□□□□ -0.52
NDRG1-228ENST00000523931 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 ABHD14A-ACY1A0A1B0GW23 586 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 STXBP3O00186 592 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 NCK2O43639 380 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 KDM4AO75164 1064 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 MX1P20591 662 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 ZXDAP98168 799 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 INSL6Q9Y581 213 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
NDRG1-228ENST00000523931 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
NDRG1-228ENST00000523931 SPTBN2O15020 2390 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 CEP250Q9BV73 2442 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 USP17L21D6R901 530 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 MBTPS2O43462 519 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 EFCAB14O75071 495 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 AVPR2P30518 371 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 LTBRP36941 435 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 CPT1AP50416 773 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 NUCB1Q02818 461 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 SMAD4Q13485 552 aaKnown RBP11.78□□□□□ -0.52
NDRG1-228ENST00000523931 GPM6BQ13491 265 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 TMEM63BQ5T3F8 832 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 TSHZ3Q63HK5 1081 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 NFRKBQ6P4R8 1299 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 KIAA1211Q6ZU35 1233 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 CHD1LQ86WJ1 897 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 OTUD7AQ8TE49 926 aaPredicted RBP11.78□□□□□ -0.52
NDRG1-228ENST00000523931 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 SDR42E1Q8WUS8 393 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
NDRG1-228ENST00000523931 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
NDRG1-228ENST00000523931 VPS13AQ96RL7 3174 aa11.78□□□□□ -0.52
NDRG1-228ENST00000523931 MED19A0JLT2 244 aaPredicted RBP11.77□□□□□ -0.53
NDRG1-228ENST00000523931 SELPP16109 830 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 CHMP4BP1P59074 171 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 IKBKEQ14164 716 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
NDRG1-228ENST00000523931 SLC9C2Q5TAH2 1124 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 TAPT1Q6NXT6 567 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 CAGE1Q8TC20 777 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 VTA1Q9NP79 307 aa11.77□□□□□ -0.53
NDRG1-228ENST00000523931 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
NDRG1-228ENST00000523931 H3BNC9 293 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 PARNO95453 639 aaKnown RBP11.76□□□□□ -0.53
NDRG1-228ENST00000523931 PDE6AP16499 860 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 CDK8P49336 464 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 OAZ1P54368 228 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
NDRG1-228ENST00000523931 SIGLEC14Q08ET2 396 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 PTGISQ16647 500 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
NDRG1-228ENST00000523931 RGS20O76081 388 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 NDUFB10O96000 172 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 NBL1P41271 181 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 PDE1AP54750 535 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 DLX2Q07687 328 aaPredicted RBP11.75□□□□□ -0.53
NDRG1-228ENST00000523931 GPNMBQ14956 572 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 TCTN1Q2MV58 587 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 CTC1Q2NKJ3 1217 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 ADSSL1Q8N142 457 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 OR6J1Q8NGC5 347 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 PI4K2BQ8TCG2 481 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 NKD2Q969F2 451 aaPredicted RBP11.75□□□□□ -0.53
NDRG1-228ENST00000523931 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 RNF216Q9NWF9 866 aaPredicted RBP11.75□□□□□ -0.53
NDRG1-228ENST00000523931 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
NDRG1-228ENST00000523931 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms