RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	HERVK_113	Q902F9	699 aa		18.27	■□□□□ 0.52
CDK16-222	ENST00000523699	ZNF576	Q9H609	170 aa		18.27	■□□□□ 0.52
CDK16-222	ENST00000523699	MSRA	Q9UJ68	235 aa		18.27	■□□□□ 0.52
CDK16-222	ENST00000523699	PFKM	P08237	780 aa		18.26	■□□□□ 0.51
CDK16-222	ENST00000523699	QRICH1	Q2TAL8	776 aa		18.26	■□□□□ 0.51
CDK16-222	ENST00000523699	NOD1	Q9Y239	953 aa		18.26	■□□□□ 0.51
CDK16-222	ENST00000523699	UMODL1	Q5DID0	1318 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	MCM3AP	O60318	1980 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	ERICH2	A1L162	156 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699		A6NJR5	290 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	TRAF1	Q13077	416 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	STXBP2	Q15833	593 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	RALYL	Q86SE5	291 aa	Known RBP	18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	IWS1	Q96ST2	819 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	RMDN3	Q96TC7	470 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	GAS2L1	Q99501	681 aa	Predicted RBP	18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	AMN	Q9BXJ7	453 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	PBX4	Q9BYU1	374 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	WNT8A	Q9H1J5	351 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	VAT1L	Q9HCJ6	419 aa		18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	TRMT13	Q9NUP7	481 aa	Known RBP	18.25	■□□□□ 0.51
CDK16-222	ENST00000523699		U3KPZ7	1027 aa	Predicted RBP	18.25	■□□□□ 0.51
CDK16-222	ENST00000523699	GH1	P01241	217 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	PTPN11	Q06124	597 aa	Predicted RBP	18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	GRIN2C	Q14957	1233 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	SART3	Q15020	963 aa	Known RBP	18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	ARHGEF16	Q5VV41	709 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	NFRKB	Q6P4R8	1299 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	SEPT14	Q6ZU15	432 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	OTOP2	Q7RTS6	562 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	JMJD4	Q9H9V9	463 aa		18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	LAMA2	P24043	3122 aa	Known RBP	18.24	■□□□□ 0.51
CDK16-222	ENST00000523699	ZBBX	A8MT70	800 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	GRXCR1	A8MXD5	290 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	CFB	P00751	764 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	CYP2C9	P11712	490 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	GSPT1	P15170	499 aa	Known RBP	18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	CHMP4BP1	P59074	171 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	NBPF20	Q3BBV1	942 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	CCDC155	Q8N6L0	562 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	RETREG2	Q8NC44	543 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	COPS5	Q92905	334 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	SLC4A7	Q9Y6M7	1214 aa		18.23	■□□□□ 0.51
CDK16-222	ENST00000523699	LCT	P09848	1927 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	KLRF2	D3W0D1	207 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	ACTN1	P12814	892 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	EIF2AK2	P19525	551 aa	Known RBP	18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	PDE4A	P27815	886 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	RFC2	P35250	354 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	PBX2	P40425	430 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	BFSP2	Q13515	415 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	SCLY	Q96I15	445 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	TAAR1	Q96RJ0	339 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	SLC28A3	Q9HAS3	691 aa		18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.22	■□□□□ 0.51
CDK16-222	ENST00000523699	PITPNM1	O00562	1244 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	ZBTB5	O15062	677 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	ARIH2	O95376	493 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	MMP3	P08254	477 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	AFG1L	Q8WV93	481 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	IL25	Q9H293	177 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	MAP3K20	Q9NYL2	800 aa	Known RBP	18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	COL20A1	Q9P218	1284 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	MRVI1	Q9Y6F6	885 aa		18.21	■□□□□ 0.51
CDK16-222	ENST00000523699	IFIT3	O14879	490 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	EIF3J	O75822	258 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	CAST	P20810	708 aa	Known RBP	18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	SEC23A	Q15436	765 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	CCDC62	Q6P9F0	684 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	CYB5R4	Q7L1T6	521 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	CHST3	Q7LGC8	479 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	HOMER1	Q86YM7	354 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	STAG2	Q8N3U4	1231 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	NCOA7	Q8NI08	942 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	TBC1D5	Q92609	795 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	PXMP2	Q9NR77	195 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	PCDHA1	Q9Y5I3	950 aa		18.2	■□□□□ 0.5
CDK16-222	ENST00000523699	ATP2A2	P16615	1042 aa	Known RBP	18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	CHML	P26374	656 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	HSD17B4	P51659	736 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	ARHGAP1	Q07960	439 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	WTAP	Q15007	396 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	DGKD	Q16760	1214 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	LY6K	Q17RY6	165 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	DEFB128	Q7Z7B8	93 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	SAMD3	Q8N6K7	520 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	KATNAL1	Q9BW62	490 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	NKX2-4	Q9H2Z4	354 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	MAD2L2	Q9UI95	211 aa		18.19	■□□□□ 0.5
CDK16-222	ENST00000523699	NR3C2	P08235	984 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	CYP21A2	P08686	494 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	LAMC2	Q13753	1193 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	GRM4	Q14833	912 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	PTGIS	Q16647	500 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	PPP2R2D	Q66LE6	453 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	KCNV1	Q6PIU1	500 aa		18.18	■□□□□ 0.5
CDK16-222	ENST00000523699	CATIP	Q7Z7H3	387 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms