RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 BRDTQ58F21 947 aaPredicted RBP20■□□□□ 0.79
CCNC-213ENST00000523541 NFXL1Q6ZNB6 911 aa20■□□□□ 0.79
CCNC-213ENST00000523541 SH3RF1Q7Z6J0 888 aa20■□□□□ 0.79
CCNC-213ENST00000523541 SGMS1Q86VZ5 419 aa20■□□□□ 0.79
CCNC-213ENST00000523541 SKAP1Q86WV1 359 aa20■□□□□ 0.79
CCNC-213ENST00000523541 BADQ92934 168 aa20■□□□□ 0.79
CCNC-213ENST00000523541 RMDN3Q96TC7 470 aa20■□□□□ 0.79
CCNC-213ENST00000523541 A0A0U1RQG5 324 aaPredicted RBP19.99■□□□□ 0.79
CCNC-213ENST00000523541 ARVCFO00192 962 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 CYTH3O43739 400 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 KPNA6O60684 536 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 CPT1AP50416 773 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 PIGSQ96S52 555 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
CCNC-213ENST00000523541 TRIM43BA6NCK2 446 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 KIAA0355O15063 1070 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 EIF3JO75822 258 aaKnown RBP19.98■□□□□ 0.79
CCNC-213ENST00000523541 CFBP00751 764 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 TTLL4Q14679 1199 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 LRIT3Q3SXY7 679 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 ARHGEF16Q5VV41 709 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 SYNE3Q6ZMZ3 975 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 DHX32Q7L7V1 743 aaKnown RBP19.98■□□□□ 0.79
CCNC-213ENST00000523541 TRIM43Q96BQ3 446 aaPredicted RBP19.98■□□□□ 0.79
CCNC-213ENST00000523541 RRP36Q96EU6 259 aaKnown RBP19.98■□□□□ 0.79
CCNC-213ENST00000523541 POLR3EQ9NVU0 708 aa19.98■□□□□ 0.79
CCNC-213ENST00000523541 TLR3O15455 904 aaKnown RBP19.97■□□□□ 0.79
CCNC-213ENST00000523541 PPP1R11O60927 126 aaPredicted RBP19.97■□□□□ 0.79
CCNC-213ENST00000523541 REC8O95072 547 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 EXOSC10Q01780 885 aaKnown RBP19.97■□□□□ 0.79
CCNC-213ENST00000523541 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 CXCL17Q6UXB2 119 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 KCNB2Q92953 911 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 PPP4R2Q9NY27 417 aa19.97■□□□□ 0.79
CCNC-213ENST00000523541 LRRC37A2A6NM11 1700 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 GCOM1H8Y6P7 765 aaPredicted RBP19.96■□□□□ 0.79
CCNC-213ENST00000523541 OPLAHO14841 1288 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 POLR2MP0CAP2 368 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 FAAP100Q0VG06 881 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 SLC35G1Q2M3R5 365 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 KCNV1Q6PIU1 500 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 FANCBQ8NB91 859 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 COL20A1Q9P218 1284 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 SEC63Q9UGP8 760 aaKnown RBP19.96■□□□□ 0.79
CCNC-213ENST00000523541 LAMA3Q16787 3333 aa19.96■□□□□ 0.79
CCNC-213ENST00000523541 LTBP2Q14767 1821 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 A6NJR5 290 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
CCNC-213ENST00000523541 NR3C2P08235 984 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
CCNC-213ENST00000523541 PTGS1P23219 599 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 CCDC62Q6P9F0 684 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 TEX2Q8IWB9 1127 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 GPHNQ9NQX3 736 aaPredicted RBP19.95■□□□□ 0.78
CCNC-213ENST00000523541 LCTP09848 1927 aa19.95■□□□□ 0.78
CCNC-213ENST00000523541 RCAN1P53805 252 aa19.94■□□□□ 0.78
CCNC-213ENST00000523541 DEFB123Q8N688 67 aa19.94■□□□□ 0.78
CCNC-213ENST00000523541 OR6J1Q8NGC5 347 aa19.94■□□□□ 0.78
CCNC-213ENST00000523541 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
CCNC-213ENST00000523541 STAM2O75886 525 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 MYL3P08590 195 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 TGFB3P10600 412 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 HSPA4P34932 840 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 FPGSQ05932 587 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 ITGA7Q13683 1181 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 SHHQ15465 462 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 TMEM63BQ5T3F8 832 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 VSIG10LQ86VR7 867 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 RASEFQ8IZ41 740 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 PDCD2LQ9BRP1 358 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 MYH6P13533 1939 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 SZT2Q5T011 3432 aa19.93■□□□□ 0.78
CCNC-213ENST00000523541 PIK3CDO00329 1044 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 TIMP1P01033 207 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 FAM126BQ8IXS8 530 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 FBXL16Q8N461 479 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
CCNC-213ENST00000523541 EMID1Q96A84 441 aaPredicted RBP19.92■□□□□ 0.78
CCNC-213ENST00000523541 MTG1Q9BT17 334 aaPredicted RBP19.92■□□□□ 0.78
CCNC-213ENST00000523541 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 PPP1R12CQ9BZL4 782 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 TBX21Q9UL17 535 aa19.92■□□□□ 0.78
CCNC-213ENST00000523541 GH1P01241 217 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 CD4P01730 458 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 EIF2AK2P19525 551 aaKnown RBP19.91■□□□□ 0.78
CCNC-213ENST00000523541 ITGB8P26012 769 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 PSMA5P28066 241 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 PURAQ00577 322 aaKnown RBP19.91■□□□□ 0.78
CCNC-213ENST00000523541 C9orf50Q5SZB4 431 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 XRRA1Q6P2D8 792 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 APOA5Q6Q788 366 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 SEPT14Q6ZU15 432 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 Q7L0L9 218 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 PIBF1Q8WXW3 757 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms