RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 USP17L12C9JPN9 530 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 USP17L21D6R901 530 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 NDUFB10O96000 172 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 CKBP12277 381 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 CDK8P49336 464 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 PTPN11Q06124 597 aaPredicted RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 G3BP1Q13283 466 aaKnown RBP eCLIP9.97□□□□□ -0.81
CASC9-204ENST00000523313 MTX1Q13505 466 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 COL9A2Q14055 689 aaPredicted RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 ZNF512BQ96KM6 892 aaPredicted RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 RIPOR3Q96MK2 946 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
CASC9-204ENST00000523313 CRNKL1Q9BZJ0 848 aaKnown RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 ACAD9Q9H845 621 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 INCENPQ9NQS7 918 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
CASC9-204ENST00000523313 HDAC5Q9UQL6 1122 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 SCN10AQ9Y5Y9 1956 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 MYO7AQ13402 2215 aa9.97□□□□□ -0.81
CASC9-204ENST00000523313 PNMA6EA0A0J9YXQ4 647 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 F5H6K3 240 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 GRM6O15303 877 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 EFCAB14O75071 495 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 EYA4O95677 639 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 NDUFV1P49821 464 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.82
CASC9-204ENST00000523313 KLRC3Q07444 240 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 MBTPS1Q14703 1052 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 LCORLQ8N3X6 602 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 RPGRIP1Q96KN7 1286 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 YME1L1Q96TA2 773 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 WDR11Q9BZH6 1224 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 VTA1Q9NP79 307 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 RNF146Q9NTX7 359 aa9.96□□□□□ -0.82
CASC9-204ENST00000523313 ATG2AQ2TAZ0 1938 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 TRIP12Q14669 1992 aaPredicted RBP9.95□□□□□ -0.82
CASC9-204ENST00000523313 LGR5O75473 907 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 AMHP03971 560 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 ICAM3P32942 547 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 ADAM15Q13444 863 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 PUM1Q14671 1186 aaKnown RBP eCLIP9.95□□□□□ -0.82
CASC9-204ENST00000523313 PTPN21Q16825 1174 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 MCTP2Q6DN12 878 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 KIAA2013Q8IYS2 634 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 SMRP1Q8NCR6 262 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 COPS5Q92905 334 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 CLEC1BQ9P126 229 aa9.95□□□□□ -0.82
CASC9-204ENST00000523313 DBNLQ9UJU6 430 aaKnown RBP9.95□□□□□ -0.82
CASC9-204ENST00000523313 USP15Q9Y4E8 981 aaPredicted RBP9.95□□□□□ -0.82
CASC9-204ENST00000523313 TPRP12270 2363 aaKnown RBP9.94□□□□□ -0.82
CASC9-204ENST00000523313 PRKAB2O43741 272 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 UPP2O95045 317 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
CASC9-204ENST00000523313 CTNNB1P35222 781 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 OAZ1P54368 228 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 RBL2Q08999 1139 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 ST3GAL2Q16842 350 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 C16orf86Q6ZW13 317 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 DBF4BQ8NFT6 615 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 MORC4Q8TE76 937 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 WNT8BQ93098 351 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 PHF7Q9BWX1 381 aaPredicted RBP9.94□□□□□ -0.82
CASC9-204ENST00000523313 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
CASC9-204ENST00000523313 A6NJR5 290 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 MUM1L1Q5H9M0 696 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 ZNF618Q5T7W0 954 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 C12orf60Q5U649 245 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 ADGRD2Q7Z7M1 963 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 LMAN2LQ9H0V9 348 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 CCDC8Q9H0W5 538 aaPredicted RBP9.93□□□□□ -0.82
CASC9-204ENST00000523313 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 CYP39A1Q9NYL5 469 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 MYH8P13535 1937 aa9.93□□□□□ -0.82
CASC9-204ENST00000523313 RBM47A0AV96 593 aaKnown RBP9.92□□□□□ -0.82
CASC9-204ENST00000523313 KPNA6O60684 536 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 LINC00271P0C7V0 271 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 ARP10275 920 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 ALAS1P13196 640 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 PDE6AP16499 860 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 COASYQ13057 564 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 TRIM71Q2Q1W2 868 aaKnown RBP9.92□□□□□ -0.82
CASC9-204ENST00000523313 BRDTQ58F21 947 aaPredicted RBP9.92□□□□□ -0.82
CASC9-204ENST00000523313 ZBTB33Q86T24 672 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 SESTD1Q86VW0 696 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 COL26A1Q96A83 441 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 DLL3Q9NYJ7 618 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 FEM1BQ9UK73 627 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 NOB1Q9ULX3 412 aaKnown RBP9.92□□□□□ -0.82
CASC9-204ENST00000523313 BARX2Q9UMQ3 279 aaPredicted RBP9.92□□□□□ -0.82
CASC9-204ENST00000523313 ACACBO00763 2458 aa9.92□□□□□ -0.82
CASC9-204ENST00000523313 RAD50Q92878 1312 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms