RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ETV3LQ6ZN32 361 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 PLEKHH3Q7Z736 793 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 SYT3Q9BQG1 590 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 PPP4R1LQ9P1A2 415 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 GGT7Q9UJ14 662 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 DIS3Q9Y2L1 958 aaKnown RBP5.09□□□□□ -1.59
PCM1-217ENST00000522998 HS3ST3A1Q9Y663 406 aa5.09□□□□□ -1.59
PCM1-217ENST00000522998 A0A087WZG4 1122 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 NPEPPSL1A6NEC2 478 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 DDX3XO00571 662 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCM1-217ENST00000522998 AURKAO14965 403 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 PPP1R11O60927 126 aaPredicted RBP5.08□□□□□ -1.6
PCM1-217ENST00000522998 TCEAL1Q15170 157 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 PALM2Q8IXS6 379 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 TAB3Q8N5C8 712 aaPredicted RBP5.08□□□□□ -1.6
PCM1-217ENST00000522998 NT5C1AQ9BXI3 368 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 CD248Q9HCU0 757 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 ZNRF3Q9ULT6 936 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 SIT1Q9Y3P8 196 aa5.08□□□□□ -1.6
PCM1-217ENST00000522998 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 STXBP3O00186 592 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 B4GALT3O60512 393 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 NTRK1P04629 796 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 IMPDH2P12268 514 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 SEPHS1P49903 392 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 KLF10Q13118 480 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 ZNF585AQ6P3V2 769 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 CD300LDQ6UXZ3 194 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 SND1Q7KZF4 910 aaKnown RBP eCLIP5.07□□□□□ -1.6
PCM1-217ENST00000522998 HS2ST1Q7LGA3 356 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 STK32CQ86UX6 486 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
PCM1-217ENST00000522998 CIR1Q86X95 450 aaPredicted RBP5.07□□□□□ -1.6
PCM1-217ENST00000522998 CPNE8Q86YQ8 564 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 DCP2Q8IU60 420 aaKnown RBP5.07□□□□□ -1.6
PCM1-217ENST00000522998 RNF34Q969K3 372 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 TM9SF2Q99805 663 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 MCMBPQ9BTE3 642 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 DEF6Q9H4E7 631 aa5.07□□□□□ -1.6
PCM1-217ENST00000522998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.07□□□□□ -1.6
PCM1-217ENST00000522998 ITGA1P56199 1179 aa5.06□□□□□ -1.6
PCM1-217ENST00000522998 RBM10P98175 930 aaKnown RBP5.06□□□□□ -1.6
PCM1-217ENST00000522998 TAGLNQ01995 201 aaKnown RBP5.06□□□□□ -1.6
PCM1-217ENST00000522998 PRR31Q5SQ13 230 aa5.06□□□□□ -1.6
PCM1-217ENST00000522998 FAM26EQ8N5C1 309 aa5.06□□□□□ -1.6
PCM1-217ENST00000522998 ADCY4Q8NFM4 1077 aa5.06□□□□□ -1.6
PCM1-217ENST00000522998 ING1Q9UK53 422 aaPredicted RBP5.06□□□□□ -1.6
PCM1-217ENST00000522998 NPHP3-ACAD11A0A0J9YXS1 232 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 GPR42O15529 346 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 NPHS1O60500 1241 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 FUCA1P04066 466 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 CYP1A1P04798 512 aaPredicted RBP5.05□□□□□ -1.6
PCM1-217ENST00000522998 ZYXQ15942 572 aaKnown RBP5.05□□□□□ -1.6
PCM1-217ENST00000522998 DPY19L1Q2PZI1 675 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 PRAMEF18Q5VWM3 479 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 DNAJC14Q6Y2X3 702 aaPredicted RBP5.05□□□□□ -1.6
PCM1-217ENST00000522998 UNC5AQ6ZN44 842 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 MIB1Q86YT6 1006 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 DNERQ8NFT8 737 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 AP5M1Q9H0R1 490 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 WHRNQ9P202 907 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 TCAF1Q9Y4C2 921 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 BACE2Q9Y5Z0 518 aa5.05□□□□□ -1.6
PCM1-217ENST00000522998 TRBV23OR9-2A0A075B6M9 112 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 C2orf71A6NGG8 1288 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 CBFA2T2O43439 604 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 PAMP19021 973 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 SELENOPP49908 381 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 IGDCC4Q8TDY8 1250 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 JADE2Q9NQC1 790 aa5.04□□□□□ -1.6
PCM1-217ENST00000522998 ZNF214Q9UL59 606 aaPredicted RBP5.04□□□□□ -1.6
PCM1-217ENST00000522998 C7orf72A4D263 438 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 MUSKO15146 869 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 VAMP4O75379 141 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 ZNF28P17035 718 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 SPDYAQ5MJ70 313 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 KIAA0825Q8IV33 1275 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 FERD3LQ96RJ6 166 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 HAUS7Q99871 368 aa5.03□□□□□ -1.6
PCM1-217ENST00000522998 SGSM2O43147 1006 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 GUCY2CP25092 1073 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 EPHB4P54760 987 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 PPP2CBP62714 309 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 PPP2CAP67775 309 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 R3HDM1Q15032 1099 aaKnown RBP5.02□□□□□ -1.61
PCM1-217ENST00000522998 ARHGEF18Q6ZSZ5 1173 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 PLEKHO2Q8TD55 490 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 ZNF341Q9BYN7 854 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 GBP3Q9H0R5 595 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 TMEM168Q9H0V1 697 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 SEMA4AQ9H3S1 761 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 L2HGDHQ9H9P8 463 aa5.02□□□□□ -1.61
PCM1-217ENST00000522998 LTBP3Q9NS15 1303 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 STAT5AP42229 794 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 TGFB2P61812 414 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 AMPD2Q01433 879 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 FHL2Q14192 279 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 FBXW10Q5XX13 1052 aa5.01□□□□□ -1.61
PCM1-217ENST00000522998 RUFY4Q6ZNE9 571 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms