RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 UBE2Q2Q8WVN8 375 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 GJA10Q969M2 543 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 RMDN3Q96TC7 470 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 PCDHB6Q9Y5E3 794 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 CLIC4Q9Y696 253 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 CCNT1O60563 726 aaKnown RBP14.1□□□□□ -0.15
PABPC1-219ENST00000522387 SLC25A27O95847 323 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 ALDH1A1P00352 501 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 MYCLP12524 364 aaPredicted RBP14.1□□□□□ -0.15
PABPC1-219ENST00000522387 TRAF1Q13077 416 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■□□ 15.9
PABPC1-219ENST00000522387 KLHL40Q2TBA0 621 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 CHST13Q8NET6 341 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 IL31RAQ8NI17 732 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
PABPC1-219ENST00000522387 ADGRA2Q96PE1 1338 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 ADORA2AP29274 412 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 HSD17B4P51659 736 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 ARHGEF16Q5VV41 709 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 GALNT17Q6IS24 598 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 DAGLBQ8NCG7 672 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 ZSCAN16Q9H4T2 348 aaPredicted RBP14.09□□□□□ -0.15
PABPC1-219ENST00000522387 TDP2O95551 362 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 CAVIN1Q6NZI2 390 aaKnown RBP14.09□□□□□ -0.15
PABPC1-219ENST00000522387 BEGAINQ9BUH8 593 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 ZSWIM8A7E2V4 1837 aa14.09□□□□□ -0.15
PABPC1-219ENST00000522387 ASTN1O14525 1302 aa14.08□□□□□ -0.15
PABPC1-219ENST00000522387 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 PSMC4P43686 418 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 SF3A1Q15459 793 aaKnown RBP14.08□□□□□ -0.16
PABPC1-219ENST00000522387 DPP9Q86TI2 863 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 GPT2Q8TD30 523 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-219ENST00000522387 MROH8Q9H579 483 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 ZCCHC17Q9NP64 241 aaKnown RBP14.08□□□□□ -0.16
PABPC1-219ENST00000522387 FBXO40Q9UH90 709 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 MYH7BA7E2Y1 1941 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 TNPO2O14787 897 aaKnown RBP14.08□□□□□ -0.16
PABPC1-219ENST00000522387 EDIL3O43854 480 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 COBLO75128 1261 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 MARCKSP29966 332 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-219ENST00000522387 ARHGAP4P98171 946 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 DNAJC5GQ8N7S2 189 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 PKD2L1Q9P0L9 805 aa14.08□□□□□ -0.16
PABPC1-219ENST00000522387 SORBS3O60504 671 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 CYP2B6P20813 491 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 ZNF76P36508 570 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-219ENST00000522387 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 PLEKHH3Q7Z736 793 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 NEK8Q86SG6 692 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 ZNFX1Q9P2E3 1918 aaKnown RBP14.07□□□□□ -0.16
PABPC1-219ENST00000522387 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 LACTBP83111 547 aaPredicted RBP14.07□□□□□ -0.16
PABPC1-219ENST00000522387 SP3Q02447 781 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 TRIM47Q96LD4 638 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 PXMP2Q9NR77 195 aa14.07□□□□□ -0.16
PABPC1-219ENST00000522387 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 SLC37A4O43826 429 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 MAPK4P31152 587 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 AP3B2Q13367 1082 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PGM5Q15124 567 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PRR16Q569H4 304 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 TTC38Q5R3I4 469 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 CD99L2Q8TCZ2 262 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 GLT8D2Q9H1C3 349 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PNMA2Q9UL42 364 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 ATP6V1DQ9Y5K8 247 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PFASO15067 1338 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PTPREP23469 700 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 RILPL1Q5EBL4 403 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 ZNF296Q8WUU4 475 aaPredicted RBP14.06□□□□□ -0.16
PABPC1-219ENST00000522387 PDCD2LQ9BRP1 358 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 WDR11Q9BZH6 1224 aa14.06□□□□□ -0.16
PABPC1-219ENST00000522387 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
PABPC1-219ENST00000522387 MCM3APO60318 1980 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 GPR25O00155 361 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 GADD45BO75293 160 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-219ENST00000522387 NR3C2P08235 984 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 MRPS9P82933 396 aaKnown RBP14.05□□□□□ -0.16
PABPC1-219ENST00000522387 CCL14Q16627 93 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
PABPC1-219ENST00000522387 SHCBP1Q8NEM2 672 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 NSUN6Q8TEA1 469 aaKnown RBP14.05□□□□□ -0.16
PABPC1-219ENST00000522387 PPP1R9BQ96SB3 815 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
PABPC1-219ENST00000522387 FOSP01100 380 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-219ENST00000522387 PDIA4P13667 645 aaKnown RBP14.04□□□□□ -0.16
PABPC1-219ENST00000522387 PTGS1P23219 599 aa14.04□□□□□ -0.16
PABPC1-219ENST00000522387 SREBF1P36956 1147 aa14.04□□□□□ -0.16
PABPC1-219ENST00000522387 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-219ENST00000522387 KRT85P78386 507 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms