RNA–Protein interactions for RNA: ENST00000522107.1

IGHV3-50-201, Transcript of immunoglobulin heavy variable 3-50 (pseudogene), humanhuman

BASIC

Gene IGHV3-50, Length 317 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-50-201ENST00000522107 RTN1Q16799 776 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 WWC2Q6AWC2 1192 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 CCDC62Q6P9F0 684 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 USP17L6PQ6QN14 398 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 C7orf61Q8IZ16 206 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 DNERQ8NFT8 737 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 DPF3Q92784 378 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 RMDN3Q96TC7 470 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 KIF2CQ99661 725 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 NCOA5Q9HCD5 579 aaKnown RBP10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 TRIOBPQ9H2D6 2365 aa10.9□□□□□ -0.66
IGHV3-50-201ENST00000522107 GOLGA8AA7E2F4 631 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 GOLGA8BA8MQT2 603 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 DYNC1LI2O43237 492 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 EDIL3O43854 480 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 CALM1P0DP23 149 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 CALM2P0DP24 149 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 CALM3P0DP25 149 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 SYN1P17600 705 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 CAPN2P17655 700 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 ITGB8P26012 769 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 CST5P28325 142 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 KIF5BP33176 963 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 MRPS9P82933 396 aaKnown RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 UBE2SQ16763 222 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 SLC39A5Q6ZMH5 540 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 TLK2Q86UE8 772 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 VTA1Q9NP79 307 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 PNMA2Q9UL42 364 aa10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 ZMYND8Q9ULU4 1186 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 V9GY48 417 aaPredicted RBP10.89□□□□□ -0.67
IGHV3-50-201ENST00000522107 A0A1W2PQ45 241 aaPredicted RBP10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 A0A1W2PQY0 241 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 STXBP3O00186 592 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 LARGE1O95461 756 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 NR3C2P08235 984 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 GNAQP50148 359 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 ACLYP53396 1101 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 RTP1P59025 263 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 SP2Q02086 613 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 ST3GAL1Q11201 340 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 PGM5Q15124 567 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 LY6KQ17RY6 165 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 IQSEC1Q6DN90 963 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 ARRDC4Q8NCT1 418 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 PHKBQ93100 1093 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 LZTS2Q9BRK4 669 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 ADD3Q9UEY8 706 aaKnown RBP10.88□□□□□ -0.67
IGHV3-50-201ENST00000522107 LOC102724159A0A0B4J2E5 919 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 TRIM43BA6NCK2 446 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 GCOM1H8Y6P7 765 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 ASGR1P07306 291 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 C6orf222P0C671 652 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 POLR2MP0CAP2 368 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 CDK7P50613 346 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 PDE4DQ08499 809 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 PWP2Q15269 919 aaKnown RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 TRIM43Q96BQ3 446 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 PGBD1Q96JS3 809 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 MAF1Q9H063 256 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 TPCN1Q9ULQ1 816 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 KIAA1217Q5T5P2 1943 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 CDH23Q9H251 3354 aa10.87□□□□□ -0.67
IGHV3-50-201ENST00000522107 KBTBD13C9JR72 458 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 EVI5O60447 810 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 PSMA5P28066 241 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 RCAN1P53805 252 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 PSMC6P62333 389 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 ARHGEF16Q5VV41 709 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 CXCL17Q6UXB2 119 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 SEPT14Q6ZU15 432 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 HEATR3Q7Z4Q2 680 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 RNF180Q86T96 592 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 SLC43A3Q8NBI5 491 aa10.86□□□□□ -0.67
IGHV3-50-201ENST00000522107 AIFM3Q96NN9 605 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms