RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 RMDN3Q96TC7 470 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 ANO3Q9BYT9 981 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 FERMT3Q86UX7 667 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 SOCS4Q8WXH5 440 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 FGD4Q96M96 766 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 GABRQQ9UN88 632 aa27.62■■■□□ 2.01
PVT1-212ENST00000521951 CCDC194A0A1B0GVG4 234 aa27.61■■■□□ 2.01
PVT1-212ENST00000521951 HSPA8P11142 646 aaKnown RBP27.61■■■□□ 2.01
PVT1-212ENST00000521951 PIK3AP1Q6ZUJ8 805 aa27.61■■■□□ 2.01
PVT1-212ENST00000521951 NOSTRINQ8IVI9 506 aa27.61■■■□□ 2.01
PVT1-212ENST00000521951 DNERQ8NFT8 737 aa27.61■■■□□ 2.01
PVT1-212ENST00000521951 PXMP2Q9NR77 195 aa27.61■■■□□ 2.01
PVT1-212ENST00000521951 ADD3Q9UEY8 706 aaKnown RBP27.61■■■□□ 2.01
PVT1-212ENST00000521951 ASTN1O14525 1302 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 FAM205CA6NFA0 338 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 ZSCAN22P10073 491 aaPredicted RBP27.6■■■□□ 2.01
PVT1-212ENST00000521951 ARHGEF6Q15052 776 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 NPLOC4Q8TAT6 608 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 NSUN6Q8TEA1 469 aaKnown RBP27.6■■■□□ 2.01
PVT1-212ENST00000521951 SLC5A4Q9NY91 659 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 DIS3Q9Y2L1 958 aaKnown RBP27.6■■■□□ 2.01
PVT1-212ENST00000521951 ZDHHC9Q9Y397 364 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 CASP8AP2Q9UKL3 1982 aa27.6■■■□□ 2.01
PVT1-212ENST00000521951 RPTORQ8N122 1335 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 MYH7BA7E2Y1 1941 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 BRD1O95696 1058 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 GNRH1P01148 92 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 HOXC6P09630 235 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 HOXD10P28358 340 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 RGS2P41220 211 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 ALDH5A1P51649 535 aaPredicted RBP27.59■■■□□ 2.01
PVT1-212ENST00000521951 NONOQ15233 471 aaKnown RBP eCLIP27.59■■■□□ 2.019e-7■■■■□ 23.6
PVT1-212ENST00000521951 FOXD4L5Q5VV16 416 aaPredicted RBP27.59■■■□□ 2.01
PVT1-212ENST00000521951 ARHGEF16Q5VV41 709 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 FOXD4L4Q8WXT5 416 aaPredicted RBP27.59■■■□□ 2.01
PVT1-212ENST00000521951 EHMT1Q9H9B1 1298 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 FRMPD4Q14CM0 1322 aa27.59■■■□□ 2.01
PVT1-212ENST00000521951 EIF2AK2P19525 551 aaKnown RBP27.58■■■□□ 2.01
PVT1-212ENST00000521951 CYP2B6P20813 491 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 FLT3LGP49771 235 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 UBXN2AP68543 259 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 PRKCZQ05513 592 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 RESTQ13127 1097 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 PDCD2LQ9BRP1 358 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 SRRDQ9UH36 339 aa27.58■■■□□ 2.01
PVT1-212ENST00000521951 SREBF1P36956 1147 aa27.57■■■□□ 2
PVT1-212ENST00000521951 INF2Q27J81 1249 aa27.57■■■□□ 2
PVT1-212ENST00000521951 TBCKQ8TEA7 893 aa27.57■■■□□ 2
PVT1-212ENST00000521951 CIZ1Q9ULV3 898 aaPredicted RBP27.57■■■□□ 2
PVT1-212ENST00000521951 CTCFP49711 727 aaPredicted RBP27.57■■■□□ 2
PVT1-212ENST00000521951 NUCB2P80303 420 aa27.57■■■□□ 2
PVT1-212ENST00000521951 PGM5Q15124 567 aa27.57■■■□□ 2
PVT1-212ENST00000521951 MAML3Q96JK9 1138 aa27.57■■■□□ 2
PVT1-212ENST00000521951 F13A1P00488 732 aa27.56■■■□□ 2
PVT1-212ENST00000521951 ARHGAP4P98171 946 aa27.56■■■□□ 2
PVT1-212ENST00000521951 BRAPQ7Z569 592 aa27.56■■■□□ 2
PVT1-212ENST00000521951 ZNF467Q7Z7K2 595 aaPredicted RBP27.56■■■□□ 2
PVT1-212ENST00000521951 IL31RAQ8NI17 732 aa27.56■■■□□ 2
PVT1-212ENST00000521951 CRYGNQ8WXF5 182 aa27.56■■■□□ 2
PVT1-212ENST00000521951 IWS1Q96ST2 819 aa27.56■■■□□ 2
PVT1-212ENST00000521951 APBA2Q99767 749 aa27.56■■■□□ 2
PVT1-212ENST00000521951 ZSCAN16Q9H4T2 348 aaPredicted RBP27.56■■■□□ 2
PVT1-212ENST00000521951 DDX49Q9Y6V7 483 aaKnown RBP27.56■■■□□ 2
PVT1-212ENST00000521951 EDIL3O43854 480 aa27.55■■■□□ 2
PVT1-212ENST00000521951 NR3C2P08235 984 aa27.55■■■□□ 2
PVT1-212ENST00000521951 LBX1P52954 281 aa27.55■■■□□ 2
PVT1-212ENST00000521951 MCM3APO60318 1980 aa27.55■■■□□ 2
PVT1-212ENST00000521951 LOC102724159A0A0B4J2E5 919 aa27.54■■■□□ 2
PVT1-212ENST00000521951 XRCC5P13010 732 aaKnown RBP27.54■■■□□ 2
PVT1-212ENST00000521951 PWP2Q15269 919 aaKnown RBP27.54■■■□□ 2
PVT1-212ENST00000521951 OTOP1Q7RTM1 612 aa27.54■■■□□ 2
PVT1-212ENST00000521951 ASB14A6NK59 587 aa27.53■■■□□ 2
PVT1-212ENST00000521951 CYP3A4P08684 503 aa27.53■■■□□ 2
PVT1-212ENST00000521951 MYCLP12524 364 aaPredicted RBP27.53■■■□□ 2
PVT1-212ENST00000521951 EDNRBP24530 442 aa27.53■■■□□ 2
PVT1-212ENST00000521951 CCL14Q16627 93 aa27.53■■■□□ 2
PVT1-212ENST00000521951 PCNX4Q63HM2 1172 aa27.53■■■□□ 2
PVT1-212ENST00000521951 VSIG10LQ86VR7 867 aa27.53■■■□□ 2
PVT1-212ENST00000521951 MORC4Q8TE76 937 aa27.53■■■□□ 2
PVT1-212ENST00000521951 FLRT1Q9NZU1 646 aa27.53■■■□□ 2
PVT1-212ENST00000521951 CHMP5Q9NZZ3 219 aa27.53■■■□□ 2
PVT1-212ENST00000521951 TRIM17Q9Y577 477 aa27.53■■■□□ 2
PVT1-212ENST00000521951 B4DLN1 442 aa27.52■■■□□ 2
PVT1-212ENST00000521951 USP11P51784 963 aa27.52■■■□□ 2
PVT1-212ENST00000521951 MAMDC4Q6UXC1 1216 aa27.52■■■□□ 2
PVT1-212ENST00000521951 NEK8Q86SG6 692 aa27.52■■■□□ 2
PVT1-212ENST00000521951 MPHOSPH6Q99547 160 aaKnown RBP27.52■■■□□ 2
PVT1-212ENST00000521951 CCND2P30279 289 aa27.51■■■□□ 2
PVT1-212ENST00000521951 PRMT2P55345 433 aa27.51■■■□□ 2
PVT1-212ENST00000521951 MRPS9P82933 396 aaKnown RBP27.51■■■□□ 2
PVT1-212ENST00000521951 PDE4DQ08499 809 aa27.51■■■□□ 2
PVT1-212ENST00000521951 IRF5Q13568 498 aa27.51■■■□□ 2
PVT1-212ENST00000521951 FAM173BQ6P4H8 233 aa27.51■■■□□ 2
PVT1-212ENST00000521951 ZFP91Q96JP5 570 aaPredicted RBP27.51■■■□□ 2
PVT1-212ENST00000521951 TINF2Q9BSI4 451 aa27.51■■■□□ 2
PVT1-212ENST00000521951 TOB1P50616 345 aaPredicted RBP27.51■■□□□ 1.99
PVT1-212ENST00000521951 STXBP2Q15833 593 aa27.51■■□□□ 1.99
PVT1-212ENST00000521951 MYSM1Q5VVJ2 828 aa27.51■■□□□ 1.99
PVT1-212ENST00000521951 OLFML2BQ68BL8 750 aa27.51■■□□□ 1.99
PVT1-212ENST00000521951 XRRA1Q6P2D8 792 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms