RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ICA1Q05084 483 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 GRB10Q13322 594 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 DEFB128Q7Z7B8 93 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 FBXL18Q96ME1 805 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
MRPS28-208ENST00000521605 TMX2Q9Y320 296 aa12.58□□□□□ -0.4
MRPS28-208ENST00000521605 VWA5AO00534 786 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 TRAK2O60296 914 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 B4GALT4O60513 344 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 CYP2D6P10635 497 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 AKR1B1P15121 316 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 GJB2P29033 226 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 FGD1P98174 961 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 TAP1Q03518 808 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 GABPAQ06546 454 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 ITGA7Q13683 1181 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 KLHL40Q2TBA0 621 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 SBK1Q52WX2 424 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 SPRED2Q7Z698 418 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 SIAH1Q8IUQ4 282 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 GJD3Q8N144 294 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 TMTC2Q8N394 836 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
MRPS28-208ENST00000521605 BRF1Q92994 677 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 ARMT1Q9H993 441 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 ZNF214Q9UL59 606 aaPredicted RBP12.57□□□□□ -0.4
MRPS28-208ENST00000521605 ADAMTS5Q9UNA0 930 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
MRPS28-208ENST00000521605 CTAGE5O15320 804 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PRC1O43663 620 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 APPP05067 770 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PSMC6P62333 389 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PKP1Q13835 747 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
MRPS28-208ENST00000521605 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 VWCEQ96DN2 955 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 CRNKL1Q9BZJ0 848 aaKnown RBP12.56□□□□□ -0.4
MRPS28-208ENST00000521605 PPP1R9AQ9ULJ8 1098 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 RIPK3Q9Y572 518 aa12.56□□□□□ -0.4
MRPS28-208ENST00000521605 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
MRPS28-208ENST00000521605 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-208ENST00000521605 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-208ENST00000521605 F13A1P00488 732 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 PTGS1P23219 599 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 COPB2P35606 906 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 TDO2P48775 406 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 ANTXR2P58335 489 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 COL9A3Q14050 684 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-208ENST00000521605 GSE1Q14687 1217 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 TBC1D10CQ8IV04 446 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 ABHD16BQ9H3Z7 469 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
MRPS28-208ENST00000521605 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 GRIN2DO15399 1336 aa12.55□□□□□ -0.4
MRPS28-208ENST00000521605 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ORC4O43929 436 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 LPXNO60711 386 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 MBD3O95983 291 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 EEF2P13639 858 aaKnown RBP12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ALADP13716 330 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 IL9P15248 144 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 SCRN1Q12765 414 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 SART3Q15020 963 aaKnown RBP12.54□□□□□ -0.4
MRPS28-208ENST00000521605 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 MFSD6Q6ZSS7 791 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 CPXCR1Q8N123 301 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 SLC43A3Q8NBI5 491 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 TEX13BQ9BXU2 312 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 LMBRD1Q9NUN5 540 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 ASTN1O14525 1302 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 MYH8P13535 1937 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 MCM3APO60318 1980 aa12.54□□□□□ -0.4
MRPS28-208ENST00000521605 CDKL5O76039 1030 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 SLC3A2P08195 630 aaKnown RBP12.53□□□□□ -0.4
MRPS28-208ENST00000521605 CYP2C9P11712 490 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 ACTN1P12814 892 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 KCNA5P22460 613 aa12.53□□□□□ -0.4
MRPS28-208ENST00000521605 HAND2P61296 217 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms