RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 FKTNO75072 461 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 PSMC4P43686 418 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 NAPAP54920 295 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 NOM1Q5C9Z4 860 aaKnown RBP25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 GPR142Q7Z601 462 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 CD99L2Q8TCZ2 262 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 VPS54Q9P1Q0 977 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 CCDC39Q9UFE4 941 aa25.15■■□□□ 1.62
PTP4A3-204ENST00000521578 DOCK3Q8IZD9 2030 aa25.14■■□□□ 1.62
PTP4A3-204ENST00000521578 SPTLC2O15270 562 aa25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 XBP1P17861 261 aa25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 CAP1Q01518 475 aa25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 KIF22Q14807 665 aa25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 MRPS27Q92552 414 aaKnown RBP25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 FBXO40Q9UH90 709 aa25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 NOL7Q9UMY1 257 aaKnown RBP25.14■■□□□ 1.61
PTP4A3-204ENST00000521578 PLEKHH3Q7Z736 793 aa25.13■■□□□ 1.61
PTP4A3-204ENST00000521578 FSIP1Q8NA03 581 aa25.13■■□□□ 1.61
PTP4A3-204ENST00000521578 TRIM47Q96LD4 638 aa25.13■■□□□ 1.61
PTP4A3-204ENST00000521578 MGAMO43451 1857 aa25.13■■□□□ 1.61
PTP4A3-204ENST00000521578 hCG_1984214I3L0E3 225 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 TNPO2O14787 897 aaKnown RBP25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 OPLAHO14841 1288 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 CAVIN2O95810 425 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 FCGRTP55899 365 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 SLC39A14Q15043 492 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 SF3A1Q15459 793 aaKnown RBP25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 SASS6Q6UVJ0 657 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 NSMFQ6X4W1 530 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 ZNF713Q8N859 430 aaPredicted RBP25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 TBC1D5Q92609 795 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 SHISA4Q96DD7 197 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 USP25Q9UHP3 1055 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 IVNS1ABPQ9Y6Y0 642 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 HSPA8P11142 646 aaKnown RBP25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 FMR1NBQ8N0W7 255 aaPredicted RBP25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 ANKRD35Q8N283 1001 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 MMP19Q99542 508 aa25.12■■□□□ 1.61
PTP4A3-204ENST00000521578 FCER1AP12319 257 aa25.11■■□□□ 1.61
PTP4A3-204ENST00000521578 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
PTP4A3-204ENST00000521578 A1CFQ9NQ94 594 aaKnown RBP25.11■■□□□ 1.61
PTP4A3-204ENST00000521578 CASP8AP2Q9UKL3 1982 aa25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 PLXNB2O15031 1838 aa25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 KINO60870 393 aaKnown RBP25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 ADCY5O95622 1261 aa25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 CFBP00751 764 aa25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 KCTD2Q14681 263 aa25.1■■□□□ 1.61
PTP4A3-204ENST00000521578 SMCO2A6NFE2 343 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 PTPREP23469 700 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 CTCFP49711 727 aaPredicted RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 LBX1P52954 281 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 PPP1R18Q6NYC8 613 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 CCDC12Q8WUD4 166 aaPredicted RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 PSTPIP2Q9H939 334 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 ZNFX1Q9P2E3 1918 aaKnown RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 STRNO43815 780 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 PPP6R2O75170 966 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 MMP1P03956 469 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 GNL2Q13823 731 aaKnown RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 BAATQ14032 418 aaPredicted RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 ANO6Q4KMQ2 910 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 AXDND1Q5T1B0 1012 aaPredicted RBP25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 RNF207Q6ZRF8 634 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 MCF2L2Q86YR7 1114 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 SH3GLB2Q9NR46 395 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 KCNJ14Q9UNX9 436 aa25.09■■□□□ 1.61
PTP4A3-204ENST00000521578 PGK2P07205 417 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 CALML3P27482 149 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 ADORA2AP29274 412 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 HOXA13P31271 388 aaPredicted RBP25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 RPS6P62753 249 aaKnown RBP25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 SLC30A10Q6XR72 485 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 CCDC148Q8NFR7 591 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 CYP39A1Q9NYL5 469 aa25.08■■□□□ 1.61
PTP4A3-204ENST00000521578 CMA1P23946 247 aa25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 NLRP5P59047 1200 aa25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 GRB14Q14449 540 aa25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 PTPAQ15257 358 aa25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 SAFBQ15424 915 aaKnown RBP eCLIP25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 CBX8Q9HC52 389 aa25.07■■□□□ 1.6
PTP4A3-204ENST00000521578 PFASO15067 1338 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 SLC15A5A6NIM6 579 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 GCOM1H8Y6P7 765 aaPredicted RBP25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 POLR2MP0CAP2 368 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 ADCY7P51828 1080 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 USP17L6PQ6QN14 398 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.06■■□□□ 1.63e-6■■■■■ 34.9
PTP4A3-204ENST00000521578 CUL5Q93034 780 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 ZMYND12Q9H0C1 365 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 FOXP1Q9H334 677 aaPredicted RBP25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 C6orf50Q9HD87 102 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 RIC8AQ9NPQ8 531 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 RBBP6Q7Z6E9 1792 aaKnown RBP25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 MSNP26038 577 aaKnown RBP25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 UBE2SQ16763 222 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 MORN1Q5T089 497 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 NOSTRINQ8IVI9 506 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 ABRAQ8N0Z2 381 aa25.06■■□□□ 1.6
PTP4A3-204ENST00000521578 PURBQ96QR8 312 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms