RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PRODHO43272 600 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 FAM153BP0C7A2 387 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 ECI1P42126 302 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 GRIA2P42262 883 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 RTP1P59025 263 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 ACBD5Q5T8D3 534 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 GALNT18Q6P9A2 607 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 SLCO6A1Q86UG4 719 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 JAMLQ86YT9 394 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 TMEM151BQ8IW70 566 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 LILRB2Q8N423 598 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 TMEM52Q8NDY8 209 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 MYLIPQ8WY64 445 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 OSBP2Q969R2 916 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 MMP19Q99542 508 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 IER2Q9BTL4 223 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 EBF1Q9UH73 591 aa4.91□□□□□ -1.62
HMGB1P41-201ENST00000520234 TRBV23-1A0A0A0MS06 115 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 MEFVO15553 781 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 NRDCO43847 1150 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 DLX3O60479 287 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 THBDP07204 575 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 PLS3P13797 630 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 L1CAMP32004 1257 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 CORO7P57737 925 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 SUMO1P63165 101 aaKnown RBP4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 KCNAB2Q13303 367 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 SF1Q15637 639 aaKnown RBP4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 CEP128Q6ZU80 1094 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 TMEM145Q8NBT3 493 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 NLGN2Q8NFZ4 835 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 FRS2Q8WU20 508 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 C1orf159Q96HA4 380 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 GPRC5CQ9NQ84 441 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 CLEC1BQ9P126 229 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 TAF6LQ9Y6J9 622 aa4.9□□□□□ -1.63
HMGB1P41-201ENST00000520234 USP2O75604 605 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 LTBRP36941 435 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 CEBPAP49715 358 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 CYP4F3Q08477 520 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 YOD1Q5VVQ6 348 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 RSPO2Q6UXX9 243 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 ABHD4Q8TB40 342 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 SH3TC2Q8TF17 1288 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 DIO2Q92813 273 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 RNPC3Q96LT9 517 aaKnown RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 SP110Q9HB58 689 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 CRTAC1Q9NQ79 661 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 SRRDQ9UH36 339 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 TMA7Q9Y2S6 64 aaKnown RBP4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 PTCH2Q9Y6C5 1203 aa4.89□□□□□ -1.63
HMGB1P41-201ENST00000520234 A0A1W2PQ27 194 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 A0A1W2PQ64 194 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 A0A1W2PQC6 194 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 A0A1W2PQD8 194 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 TLDC2A0PJX2 215 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 OTOL1A6NHN0 477 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 NOTOA8MTQ0 251 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 RFXAPO00287 272 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 NPHS1O60500 1241 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 ERVFC1P60507 584 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 LAPTM5Q13571 262 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 HSF5Q4G112 596 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 FAM209AQ5JX71 171 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 NLRX1Q86UT6 975 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 PPIL6Q8IXY8 311 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 SYNPOQ8N3V7 929 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 DCAF4Q8WV16 495 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 KISS1RQ969F8 398 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 JMJD8Q96S16 334 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 ZFYVE21Q9BQ24 234 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 TMEM260Q9NX78 707 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 ACSL6Q9UKU0 697 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 MRPS23Q9Y3D9 190 aaKnown RBP4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 NPFFR2Q9Y5X5 522 aa4.88□□□□□ -1.63
HMGB1P41-201ENST00000520234 MYO1BO43795 1136 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 PNLIPP16233 465 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 GTF2A2P52657 109 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 DLG4P78352 724 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 PRSS53Q2L4Q9 553 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 FOXB2Q5VYV0 432 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 DENND5AQ6IQ26 1287 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 USP53Q70EK8 1073 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 HOMER1Q86YM7 354 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 EXOC2Q96KP1 924 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 C19orf44Q9H6X5 657 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 GPR27Q9NS67 375 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 GPR160Q9UJ42 338 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 TBX22Q9Y458 520 aa4.87□□□□□ -1.63
HMGB1P41-201ENST00000520234 C7orf72A4D263 438 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 SEMA7AO75326 666 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 NAT1P18440 290 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 TRHRP34981 398 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 ARL4AP40617 200 aa4.86□□□□□ -1.63
HMGB1P41-201ENST00000520234 GABREP78334 506 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms