RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RPTORQ8N122 1335 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 SOWAHBA6NEL2 793 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 GNRH1P01148 92 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 RESTQ13127 1097 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 PIK3AP1Q6ZUJ8 805 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 BRAPQ7Z569 592 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 DPP9Q86TI2 863 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 NSUN6Q8TEA1 469 aaKnown RBP20.33■□□□□ 0.85
SDC2-205ENST00000520233 PGBD1Q96JS3 809 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 RMDN3Q96TC7 470 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 PXMP2Q9NR77 195 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 DIS3Q9Y2L1 958 aaKnown RBP20.33■□□□□ 0.85
SDC2-205ENST00000520233 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
SDC2-205ENST00000520233 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 F13A1P00488 732 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 HOXC6P09630 235 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 HOXD10P28358 340 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 SREBF1P36956 1147 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 RGS2P41220 211 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 CAP1Q01518 475 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
SDC2-205ENST00000520233 EARS2Q5JPH6 523 aaKnown RBP20.32■□□□□ 0.84
SDC2-205ENST00000520233 ARHGEF16Q5VV41 709 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 TBCKQ8TEA7 893 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 FGD4Q96M96 766 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 CHMP5Q9NZZ3 219 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 MGAMO43451 1857 aa20.32■□□□□ 0.84
SDC2-205ENST00000520233 B4DLN1 442 aa20.31■□□□□ 0.84
SDC2-205ENST00000520233 ALDH5A1P51649 535 aaPredicted RBP20.31■□□□□ 0.84
SDC2-205ENST00000520233 ZNF467Q7Z7K2 595 aaPredicted RBP20.31■□□□□ 0.84
SDC2-205ENST00000520233 CRYGNQ8WXF5 182 aa20.31■□□□□ 0.84
SDC2-205ENST00000520233 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
SDC2-205ENST00000520233 PDCD2LQ9BRP1 358 aa20.31■□□□□ 0.84
SDC2-205ENST00000520233 ASTN1O14525 1302 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 FAM205CA6NFA0 338 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 FOXN1O15353 648 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 HSPA1AP0DMV8 641 aaKnown RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 HSPA1BP0DMV9 641 aaKnown RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 HSPA8P11142 646 aaKnown RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 EIF2AK2P19525 551 aaKnown RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 ARHGAP4P98171 946 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 PGM5Q15124 567 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 INF2Q27J81 1249 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 NPLOC4Q8TAT6 608 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 MPHOSPH6Q99547 160 aaKnown RBP20.3■□□□□ 0.84
SDC2-205ENST00000520233 APBA2Q99767 749 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 SRRDQ9UH36 339 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 ZSWIM8A7E2V4 1837 aa20.3■□□□□ 0.84
SDC2-205ENST00000520233 ASB14A6NK59 587 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 CYP3A4P08684 503 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 FLT3LGP49771 235 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 USP11P51784 963 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 UBXN2AP68543 259 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 PRKCZQ05513 592 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 PCNX4Q63HM2 1172 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 XRRA1Q6P2D8 792 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 NEK8Q86SG6 692 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 MAML3Q96JK9 1138 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 NOL7Q9UMY1 257 aaKnown RBP20.29■□□□□ 0.84
SDC2-205ENST00000520233 GABRQQ9UN88 632 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 LCTP09848 1927 aa20.29■□□□□ 0.84
SDC2-205ENST00000520233 ZNFX1Q9P2E3 1918 aaKnown RBP20.28■□□□□ 0.84
SDC2-205ENST00000520233 NR3C2P08235 984 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 XRCC5P13010 732 aaKnown RBP20.28■□□□□ 0.84
SDC2-205ENST00000520233 CYP2B6P20813 491 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 EDNRBP24530 442 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 CCND2P30279 289 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 TRAPPC10P48553 1259 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 CTCFP49711 727 aaPredicted RBP20.28■□□□□ 0.84
SDC2-205ENST00000520233 PRMT2P55345 433 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 MYSM1Q5VVJ2 828 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 MAMDC4Q6UXC1 1216 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 MSL3Q8N5Y2 521 aaKnown RBP20.28■□□□□ 0.84
SDC2-205ENST00000520233 IL31RAQ8NI17 732 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 MORC4Q8TE76 937 aa20.28■□□□□ 0.84
SDC2-205ENST00000520233 EDIL3O43854 480 aa20.27■□□□□ 0.84
SDC2-205ENST00000520233 IRF5Q13568 498 aa20.27■□□□□ 0.84
SDC2-205ENST00000520233 OLFML2BQ68BL8 750 aa20.27■□□□□ 0.84
SDC2-205ENST00000520233 VSIG10LQ86VR7 867 aa20.27■□□□□ 0.84
SDC2-205ENST00000520233 NAP1L4Q99733 375 aaKnown RBP20.27■□□□□ 0.84
SDC2-205ENST00000520233 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
SDC2-205ENST00000520233 CIITAP33076 1130 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 PDE4DQ08499 809 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 STXBP2Q15833 593 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 MOXD1Q6UVY6 613 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 OTOP1Q7RTM1 612 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
SDC2-205ENST00000520233 SYNGAP1Q96PV0 1343 aa20.26■□□□□ 0.83
SDC2-205ENST00000520233 PLXNA1Q9UIW2 1896 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 STAM2O75886 525 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
SDC2-205ENST00000520233 MRPS9P82933 396 aaKnown RBP20.25■□□□□ 0.83
SDC2-205ENST00000520233 LETM2Q2VYF4 491 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 PPP4R3AQ6IN85 833 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 ARMCX2Q7L311 632 aa20.25■□□□□ 0.83
SDC2-205ENST00000520233 TINF2Q9BSI4 451 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms