RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 DPF3Q92784 378 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 BRF1Q92994 677 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 IWS1Q96ST2 819 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
PABPC1-214ENST00000520142 FRMPD4Q14CM0 1322 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
PABPC1-214ENST00000520142 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 CFBP00751 764 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 ACLYP53396 1101 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 APOBRQ0VD83 1088 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-214ENST00000520142 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 DUSP28Q4G0W2 176 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 PRO3102Q9H379 93 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
PABPC1-214ENST00000520142 MOXD2PA6NHM9 499 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 KBTBD13C9JR72 458 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-214ENST00000520142 MEIS2O14770 477 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 EVI5O60447 810 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 RGS20O76081 388 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 NR3C2P08235 984 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-214ENST00000520142 ANAPC15P60006 121 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 PDE4DQ08499 809 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 NTRK3Q16288 839 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 KCNA10Q16322 511 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 RTN1Q16799 776 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 HABP4Q5JVS0 413 aaKnown RBP12.84□□□□□ -0.35
PABPC1-214ENST00000520142 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 VSIG10LQ86VR7 867 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 PIBF1Q8WXW3 757 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 CEP290O15078 2479 aa12.84□□□□□ -0.35
PABPC1-214ENST00000520142 A0A1W2PQ45 241 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 A0A1W2PQY0 241 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 B4DLN1 442 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 ARIH2O95376 493 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 PDIA3P30101 505 aaKnown RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 PGM5Q15124 567 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 IL31RAQ8NI17 732 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 SCFD2Q8WU76 684 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 C22orf23Q9BZE7 217 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 WDR11Q9BZH6 1224 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-214ENST00000520142 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
PABPC1-214ENST00000520142 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 GOLGA8BA8MQT2 603 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 ASGR1P07306 291 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 CDK7P50613 346 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 BEX3Q00994 111 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 STXBP2Q15833 593 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 GNASQ5JWF2 1037 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 ARHGEF16Q5VV41 709 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 PCSK9Q8NBP7 692 aaKnown RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 CYP46A1Q9Y6A2 500 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
PABPC1-214ENST00000520142 ELP1O95163 1332 aa12.82□□□□□ -0.36
PABPC1-214ENST00000520142 A6NJR5 290 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.366e-37■■■□□ 16.7
PABPC1-214ENST00000520142 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 RTP1P59025 263 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 PKN1Q16512 942 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 USP17L6PQ6QN14 398 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 TEX2Q8IWB9 1127 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 C7orf61Q8IZ16 206 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 SLC43A3Q8NBI5 491 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 SPC25Q9HBM1 224 aa12.81□□□□□ -0.36
PABPC1-214ENST00000520142 RANBP2P49792 3224 aaKnown RBP12.81□□□□□ -0.36
PABPC1-214ENST00000520142 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
PABPC1-214ENST00000520142 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
PABPC1-214ENST00000520142 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms