RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 OR14I1A6ND48 311 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 HMGB1P1B2RPK0 211 aaPredicted RBP7.92□□□□□ -1.14
SQLE-203ENST00000518931 TPD52L2O43399 206 aaKnown RBP7.92□□□□□ -1.14
SQLE-203ENST00000518931 MPOP05164 745 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 LCP1P13796 627 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 LTBRP36941 435 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 KCNAB2Q13303 367 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 BICRALQ6AI39 1079 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 LZTR1Q8N653 840 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 RCBTB1Q8NDN9 531 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 USP33Q8TEY7 942 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 BTG4Q9NY30 223 aa7.92□□□□□ -1.14
SQLE-203ENST00000518931 TIMM13Q9Y5L4 95 aaPredicted RBP7.92□□□□□ -1.14
SQLE-203ENST00000518931 FUCA1P04066 466 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 PTMSP20962 102 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 NTRK3Q16288 839 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 LONRF2Q1L5Z9 754 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 ZNF605Q86T29 641 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 THAP3Q8WTV1 239 aaPredicted RBP7.91□□□□□ -1.14
SQLE-203ENST00000518931 DCP1AQ9NPI6 582 aaPredicted RBP7.91□□□□□ -1.14
SQLE-203ENST00000518931 PCDHA2Q9Y5H9 948 aa7.91□□□□□ -1.14
SQLE-203ENST00000518931 MAFGO15525 162 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 BCL6P41182 706 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
SQLE-203ENST00000518931 RAB3GAP1Q15042 981 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 TESK1Q15569 626 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 JMYQ8N9B5 988 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 DCAF4Q8WV16 495 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 CHAMP1Q96JM3 812 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 EXOC2Q96KP1 924 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 SLC26A8Q96RN1 970 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 DHRS4Q9BTZ2 278 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 EPB41L4BQ9H329 900 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 ZNF552Q9H707 407 aaPredicted RBP7.9□□□□□ -1.14
SQLE-203ENST00000518931 TNFRSF12AQ9NP84 129 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.9□□□□□ -1.143e-7■■■■■ 44.7
SQLE-203ENST00000518931 MARCH2Q9P0N8 246 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 NPFFR2Q9Y5X5 522 aa7.9□□□□□ -1.14
SQLE-203ENST00000518931 NUDT19A8MXV4 375 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 MYO1BO43795 1136 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 ZC3H12BQ5HYM0 836 aaKnown RBP7.89□□□□□ -1.15
SQLE-203ENST00000518931 CCDC181Q5TID7 509 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 KCNT2Q6UVM3 1135 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 CEP68Q76N32 757 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 PLEKHO2Q8TD55 490 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 FBLN5Q9UBX5 448 aa7.89□□□□□ -1.15
SQLE-203ENST00000518931 MSCO60682 206 aa7.88□□□□□ -1.15
SQLE-203ENST00000518931 SUMO1P63165 101 aaKnown RBP7.88□□□□□ -1.15
SQLE-203ENST00000518931 C2orf27AQ580R0 203 aa7.88□□□□□ -1.15
SQLE-203ENST00000518931 FMNL2Q96PY5 1086 aa7.88□□□□□ -1.15
SQLE-203ENST00000518931 METTL14Q9HCE5 456 aaKnown RBP7.88□□□□□ -1.15
SQLE-203ENST00000518931 GPR27Q9NS67 375 aa7.88□□□□□ -1.15
SQLE-203ENST00000518931 KLHL14Q9P2G3 628 aa7.88□□□□□ -1.15
SQLE-203ENST00000518931 MRPS23Q9Y3D9 190 aaKnown RBP7.88□□□□□ -1.15
SQLE-203ENST00000518931 C22orf46C9J442 243 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 DBHP09172 617 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 GTF2A2P52657 109 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 LSAMPQ13449 338 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 TMEM132EQ6IEE7 984 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 PAQR3Q6TCH7 311 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 RSPO2Q6UXX9 243 aaPredicted RBP7.87□□□□□ -1.15
SQLE-203ENST00000518931 NOP9Q86U38 636 aaKnown RBP7.87□□□□□ -1.15
SQLE-203ENST00000518931 CABP7Q86V35 215 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 ZSWIM2Q8NEG5 633 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 SH3TC2Q8TF17 1288 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 KISS1RQ969F8 398 aaPredicted RBP7.87□□□□□ -1.15
SQLE-203ENST00000518931 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
SQLE-203ENST00000518931 TMEM169Q96HH4 297 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 KANSL2Q9H9L4 492 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 FBXL7Q9UJT9 491 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 PTCH2Q9Y6C5 1203 aa7.87□□□□□ -1.15
SQLE-203ENST00000518931 ZC3H12DA2A288 527 aaKnown RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 F8W031 263 aaPredicted RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 FARP2O94887 1054 aaPredicted RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 NTRK1P04629 796 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 CYBBP04839 570 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 GLI4P10075 376 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 FPR2P25090 351 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 CBX2Q14781 532 aaPredicted RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 NR1I3Q14994 352 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 STYK1Q6J9G0 422 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 GIMAP6Q6P9H5 292 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 RPTNQ6XPR3 784 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 FBXO15Q8NCQ5 510 aaPredicted RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 PKNOX2Q96KN3 472 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 RXFP1Q9HBX9 757 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 DBR1Q9UK59 544 aaKnown RBP7.86□□□□□ -1.15
SQLE-203ENST00000518931 TRAF6Q9Y4K3 522 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 ASXL2Q76L83 1435 aa7.86□□□□□ -1.15
SQLE-203ENST00000518931 A0A0U1RQG5 324 aaPredicted RBP7.85□□□□□ -1.15
SQLE-203ENST00000518931 ABLIM1O14639 778 aa7.85□□□□□ -1.15
SQLE-203ENST00000518931 SRGAP3O43295 1099 aa7.85□□□□□ -1.15
SQLE-203ENST00000518931 VIPR1P32241 457 aa7.85□□□□□ -1.15
SQLE-203ENST00000518931 ANAPC15P60006 121 aa7.85□□□□□ -1.15
SQLE-203ENST00000518931 YBX1P67809 324 aaKnown RBP7.85□□□□□ -1.15
SQLE-203ENST00000518931 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms