RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MBLAC2Q68D91 279 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 KCNT2Q6UVM3 1135 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 NIM1KQ8IY84 436 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 MYLIPQ8WY64 445 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 TRIM39Q9HCM9 518 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 CRTAC1Q9NQ79 661 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.49□□□□□ -1.37
SQLE-202ENST00000518604 MAGEC2Q9UBF1 373 aaPredicted RBP6.49□□□□□ -1.37
SQLE-202ENST00000518604 ADGRE2Q9UHX3 823 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 ASXL2Q76L83 1435 aa6.49□□□□□ -1.37
SQLE-202ENST00000518604 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 B4E1Z4 1266 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 H7BY64 318 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 LCP1P13796 627 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 ATG4DQ86TL0 474 aaPredicted RBP6.48□□□□□ -1.37
SQLE-202ENST00000518604 Q8N1Y9 231 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 MFSD3Q96ES6 412 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 ALG1Q9BT22 464 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 PDLIM7Q9NR12 457 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 PCDHA2Q9Y5H9 948 aa6.48□□□□□ -1.37
SQLE-202ENST00000518604 WNT9AO14904 365 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 NPTXRO95502 500 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 ASLP04424 464 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 GUCY1A3Q02108 690 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 PAK1Q13153 545 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 TM4SF20Q53R12 229 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 RNF187Q5TA31 235 aaPredicted RBP6.47□□□□□ -1.37
SQLE-202ENST00000518604 CBLL1Q75N03 491 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 BRAPQ7Z569 592 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 MTDHQ86UE4 582 aaKnown RBP6.47□□□□□ -1.37
SQLE-202ENST00000518604 NLRX1Q86UT6 975 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 LZTR1Q8N653 840 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 DPF3Q92784 378 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 IMPACTQ9P2X3 320 aa6.47□□□□□ -1.37
SQLE-202ENST00000518604 ARVCFO00192 962 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 BIN1O00499 593 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 PSPNO60542 156 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 MSCO60682 206 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 CRTAMO95727 393 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 PNLIPP16233 465 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 PRKCAP17252 672 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 ARL4AP40617 200 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 BCL6P41182 706 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 CYP4F8P98187 520 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 MVKQ03426 396 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 NUP43Q8NFH3 380 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 ABHD4Q8TB40 342 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 TMEM169Q96HH4 297 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 SCLYQ96I15 445 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 MTA3Q9BTC8 594 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.38
SQLE-202ENST00000518604 OAS3Q9Y6K5 1087 aaKnown RBP6.46□□□□□ -1.38
SQLE-202ENST00000518604 X6R8D5 127 aa6.46□□□□□ -1.38
SQLE-202ENST00000518604 A0A1W2PQJ5 194 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 TCRBV16S1A1N1A0A5B0 115 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 FAM47E-STBD1D6RA91 191 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 GSTA4O15217 222 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 DNAJC8O75937 253 aaPredicted RBP6.45□□□□□ -1.38
SQLE-202ENST00000518604 NCLP19338 710 aaKnown RBP6.45□□□□□ -1.38
SQLE-202ENST00000518604 IGFALSP35858 605 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 FLT3P36888 993 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 ERVFC1P60507 584 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 MROH9Q5TGP6 573 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 CEP68Q76N32 757 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 NBPF11Q86T75 865 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 RIOX2Q8IUF8 465 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 PANK1Q8TE04 598 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 SHISA4Q96DD7 197 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 TRMT2BQ96GJ1 504 aaKnown RBP6.45□□□□□ -1.38
SQLE-202ENST00000518604 KIRREL1Q96J84 757 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 CHAMP1Q96JM3 812 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 C19orf44Q9H6X5 657 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 GULP1Q9UBP9 304 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 GPR160Q9UJ42 338 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 PCDHA9Q9Y5H5 950 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 PCDHA8Q9Y5H6 950 aa6.45□□□□□ -1.38
SQLE-202ENST00000518604 PPP1R11O60927 126 aaPredicted RBP6.44□□□□□ -1.38
SQLE-202ENST00000518604 SOD2P04179 222 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 SDSP20132 328 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 POU3F2P20265 443 aaPredicted RBP6.44□□□□□ -1.38
SQLE-202ENST00000518604 MASP1P48740 699 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 C21orf62-AS1Q17RA5 79 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 ZNF662Q6ZS27 426 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 FGD2Q7Z6J4 655 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 CABP7Q86V35 215 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 DHX37Q8IY37 1157 aaKnown RBP6.44□□□□□ -1.38
SQLE-202ENST00000518604 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 PLEKHO2Q8TD55 490 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 USP33Q8TEY7 942 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 PLCD4Q9BRC7 762 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 SPC25Q9HBM1 224 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 CLDND1Q9NY35 253 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 MARCH2Q9P0N8 246 aa6.44□□□□□ -1.38
SQLE-202ENST00000518604 COA3Q9Y2R0 106 aaPredicted RBP6.44□□□□□ -1.38
SQLE-202ENST00000518604 ANKRD62A6NC57 917 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 C22orf46C9J442 243 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms