RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ATP11BQ9Y2G3 1177 aa21.58■■□□□ 1.05
FAM49B-208ENST00000518344 PDE4DIPQ5VU43 2346 aa21.58■■□□□ 1.04
FAM49B-208ENST00000518344 SYN1P17600 705 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 ACLYP53396 1101 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 RTP1P59025 263 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 BEX3Q00994 111 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 TLK2Q86UE8 772 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 FCHSD1Q86WN1 690 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 SAMD3Q8N6K7 520 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 PCSK9Q8NBP7 692 aaKnown RBP21.57■■□□□ 1.04
FAM49B-208ENST00000518344 IWS1Q96ST2 819 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
FAM49B-208ENST00000518344 A0A1W2PQ45 241 aaPredicted RBP21.56■■□□□ 1.04
FAM49B-208ENST00000518344 A0A1W2PQY0 241 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
FAM49B-208ENST00000518344 MOXD2PA6NHM9 499 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 GHRHRQ02643 423 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 STXBP2Q15833 593 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 CCSAPQ6IQ19 270 aaPredicted RBP21.56■■□□□ 1.04
FAM49B-208ENST00000518344 SEPT14Q6ZU15 432 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 RUFY3Q7L099 469 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 VTI1AQ96AJ9 217 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 CYP46A1Q9Y6A2 500 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 LCTP09848 1927 aa21.56■■□□□ 1.04
FAM49B-208ENST00000518344 ASGR1P07306 291 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 MYCLP12524 364 aaPredicted RBP21.55■■□□□ 1.04
FAM49B-208ENST00000518344 CST5P28325 142 aaPredicted RBP21.55■■□□□ 1.04
FAM49B-208ENST00000518344 METAP2P50579 478 aaKnown RBP eCLIP21.55■■□□□ 1.04
FAM49B-208ENST00000518344 SCFD2Q8WU76 684 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 ZSWIM6Q9HCJ5 1215 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 STARD7Q9NQZ5 370 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 Q9Y3F1 56 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 MCM3APO60318 1980 aa21.55■■□□□ 1.04
FAM49B-208ENST00000518344 CTAGE5O15320 804 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 NR3C2P08235 984 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 CDC27P30260 824 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 PPP2R5BQ15173 497 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 FSCN1Q16658 493 aaKnown RBP21.54■■□□□ 1.04
FAM49B-208ENST00000518344 TRIM60Q495X7 471 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 CHRDL2Q6WN34 429 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 HEATR3Q7Z4Q2 680 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 CUL5Q93034 780 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 GLT1D1Q96MS3 346 aa21.54■■□□□ 1.04
FAM49B-208ENST00000518344 TXNP10599 105 aaKnown RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 ADD1P35611 737 aaKnown RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 TTLL4Q14679 1199 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 FBXL16Q8N461 479 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 OR6J1Q8NGC5 347 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 PDCD2LQ9BRP1 358 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 UPF3BQ9BZI7 483 aaKnown RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 FAM217BQ9NTX9 383 aaPredicted RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 COLQQ9Y215 455 aaPredicted RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 V9GY48 417 aaPredicted RBP21.53■■□□□ 1.04
FAM49B-208ENST00000518344 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
FAM49B-208ENST00000518344 ZEB2O60315 1214 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
FAM49B-208ENST00000518344 RCAN1P53805 252 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 NKX3-2P78367 333 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 SNX17Q15036 470 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 USP17L6PQ6QN14 398 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 COPS5Q92905 334 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 GPKOWQ92917 476 aaPredicted RBP eCLIP21.52■■□□□ 1.04
FAM49B-208ENST00000518344 AGXT2Q9BYV1 514 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 TM6SF1Q9BZW5 370 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 PCDH10Q9P2E7 1040 aa21.52■■□□□ 1.04
FAM49B-208ENST00000518344 MYH6P13533 1939 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 CCDC196A0A1B0GTZ2 297 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
FAM49B-208ENST00000518344 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
FAM49B-208ENST00000518344 FUT2Q10981 343 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 PGM5Q15124 567 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 C1orf53Q5VUE5 145 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 CXCL17Q6UXB2 119 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 PSTPIP2Q9H939 334 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 PRDM5Q9NQX1 630 aaPredicted RBP21.51■■□□□ 1.03
FAM49B-208ENST00000518344 PRKAG2Q9UGJ0 569 aa21.51■■□□□ 1.03
FAM49B-208ENST00000518344 BAZ2BQ9UIF8 2168 aaKnown RBP21.51■■□□□ 1.03
FAM49B-208ENST00000518344 LRRC37A2A6NM11 1700 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 ARIH2O95376 493 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 CCND2P30279 289 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 TLE2Q04725 743 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 LY6KQ17RY6 165 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 IL31RAQ8NI17 732 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 ZFP91Q96JP5 570 aaPredicted RBP21.5■■□□□ 1.03
FAM49B-208ENST00000518344 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 ELP1O95163 1332 aa21.5■■□□□ 1.03
FAM49B-208ENST00000518344 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
FAM49B-208ENST00000518344 MEIS2O14770 477 aa21.49■■□□□ 1.03
FAM49B-208ENST00000518344 PQBP1O60828 265 aaKnown RBP21.49■■□□□ 1.03
FAM49B-208ENST00000518344 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
FAM49B-208ENST00000518344 TOB2Q14106 344 aaPredicted RBP21.49■■□□□ 1.03
FAM49B-208ENST00000518344 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
FAM49B-208ENST00000518344 LARP6Q9BRS8 491 aaKnown RBP21.49■■□□□ 1.03
FAM49B-208ENST00000518344 MRVI1Q9Y6F6 885 aa21.49■■□□□ 1.03
FAM49B-208ENST00000518344 PIK3CDO00329 1044 aa21.48■■□□□ 1.03
FAM49B-208ENST00000518344 MYL3P08590 195 aa21.48■■□□□ 1.03
FAM49B-208ENST00000518344 PDIA3P30101 505 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms