RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PALM3A6NDB9 673 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-205ENST00000518060 CCDC69A6NI79 296 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 SLC27A2O14975 620 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 NKRFO15226 690 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPIDR-205ENST00000518060 PPP1R11O60927 126 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-205ENST00000518060 TIMP1P01033 207 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 EDNRBP24530 442 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
SPIDR-205ENST00000518060 MCM5P33992 734 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 ANTXR2P58335 489 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 STXBP2Q15833 593 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 FAM161BQ96MY7 647 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 TBX21Q9UL17 535 aa12.27□□□□□ -0.45
SPIDR-205ENST00000518060 ARIH2O95376 493 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 NEFLP07196 543 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-205ENST00000518060 KIF5BP33176 963 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 CDK7P50613 346 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 EPHB4P54760 987 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 NKX3-2P78367 333 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 TRAF1Q13077 416 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 PPIGQ13427 754 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■□□ 18.8
SPIDR-205ENST00000518060 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 FCHSD1Q86WN1 690 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 RAB11FIP4Q86YS3 637 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 TMEM199Q8N511 208 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 MTG1Q9BT17 334 aaPredicted RBP12.26□□□□□ -0.45
SPIDR-205ENST00000518060 TRPV6Q9H1D0 765 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 LY9Q9HBG7 655 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 LCTP09848 1927 aa12.26□□□□□ -0.45
SPIDR-205ENST00000518060 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 RBM47A0AV96 593 aaKnown RBP12.25□□□□□ -0.45
SPIDR-205ENST00000518060 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
SPIDR-205ENST00000518060 SORBS3O60504 671 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 CDC45O75419 566 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 DDAH1O94760 285 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 GH1P01241 217 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 CSF2RAP15509 400 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 RXRAP19793 462 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 CYP2C18P33260 490 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 TROAPQ12815 778 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 LY6KQ17RY6 165 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 ZNF697Q5TEC3 545 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 MFSD5Q6N075 450 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 PPP1R13LQ8WUF5 828 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 RRP36Q96EU6 259 aaKnown RBP12.25□□□□□ -0.45
SPIDR-205ENST00000518060 IWS1Q96ST2 819 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 PXMP2Q9NR77 195 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
SPIDR-205ENST00000518060 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
SPIDR-205ENST00000518060 SH2B2O14492 632 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-205ENST00000518060 OPLAHO14841 1288 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 B4GALT4O60513 344 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 NR3C2P08235 984 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 ACRP10323 421 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 HSD17B4P51659 736 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 CCL23P55773 120 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
SPIDR-205ENST00000518060 SLC35G1Q2M3R5 365 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 AFG1LQ8WV93 481 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 MTMR8Q96EF0 704 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 MAF1Q9H063 256 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 ALDH8A1Q9H2A2 487 aaPredicted RBP12.24□□□□□ -0.45
SPIDR-205ENST00000518060 RIOX1Q9H6W3 641 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 TRMT13Q9NUP7 481 aaKnown RBP12.24□□□□□ -0.45
SPIDR-205ENST00000518060 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
SPIDR-205ENST00000518060 UMODL1Q5DID0 1318 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 CYTH3O43739 400 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 KPNA6O60684 536 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
SPIDR-205ENST00000518060 CD4P01730 458 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 MMP3P08254 477 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 CCND2P30279 289 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 GNAQP50148 359 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 NBPF20Q3BBV1 942 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
SPIDR-205ENST00000518060 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 SMARCC2Q8TAQ2 1214 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 CUL5Q93034 780 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-205ENST00000518060 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPIDR-205ENST00000518060 PDCD2LQ9BRP1 358 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
SPIDR-205ENST00000518060 NAP1L2Q9ULW6 460 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-205ENST00000518060 A6NJR5 290 aa12.22□□□□□ -0.45
SPIDR-205ENST00000518060 PLEKHA8P1O95397 391 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms