RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 COL20A1Q9P218 1284 aa20.22■□□□□ 0.83
CTNNA1-206ENST00000517980 FOSL2P15408 326 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 CPT1AP50416 773 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 PTH1RQ03431 593 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 NBPF20Q3BBV1 942 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 ASPRV1Q53RT3 343 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 FAM47CQ5HY64 1035 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 RASIP1Q5U651 963 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 SEPT14Q6ZU15 432 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 FBXO11Q86XK2 927 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 SYTL5Q8TDW5 730 aaPredicted RBP20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 SCFD2Q8WU76 684 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 TIFAQ96CG3 184 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 MPHOSPH6Q99547 160 aaKnown RBP20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 UBAC1Q9BSL1 405 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 PBX4Q9BYU1 374 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 WNT8AQ9H1J5 351 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 ZNF576Q9H609 170 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 PRUNE2Q8WUY3 3088 aa20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 TRIP12Q14669 1992 aaPredicted RBP20.21■□□□□ 0.83
CTNNA1-206ENST00000517980 SCN5AQ14524 2016 aa20.2■□□□□ 0.83
CTNNA1-206ENST00000517980 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 IFIT1BQ5T764 474 aaKnown RBP20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 PSRC1Q6PGN9 363 aaPredicted RBP20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 HERVK_113Q902F9 699 aa20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 MTG1Q9BT17 334 aaPredicted RBP20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 CNNM2Q9H8M5 875 aa20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 ABCB11O95342 1321 aa20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 GBF1Q92538 1859 aa20.2■□□□□ 0.82
CTNNA1-206ENST00000517980 B4DLN1 442 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 SEC23AQ15436 765 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 VWCEQ96DN2 955 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 RMDN3Q96TC7 470 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 SEZ6LQ9BYH1 1024 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 MRPL11Q9Y3B7 192 aaKnown RBP20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
CTNNA1-206ENST00000517980 SCN10AQ9Y5Y9 1956 aa20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 NKRFO15226 690 aaKnown RBP eCLIP20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 TTLL4Q14679 1199 aa20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 COL25A1Q9BXS0 654 aaPredicted RBP20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 TAF6LQ9Y6J9 622 aa20.18■□□□□ 0.82
CTNNA1-206ENST00000517980 TMEM265A0A087WTH1 108 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 A6NJR5 290 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 KLRF2D3W0D1 207 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 CFBP00751 764 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 CHMLP26374 656 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 NT5C2P49902 561 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 BRDTQ58F21 947 aaPredicted RBP20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 ARHGEF16Q5VV41 709 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 CCDC62Q6P9F0 684 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 NSUN6Q8TEA1 469 aaKnown RBP20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 AFG1LQ8WV93 481 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 SENP2Q9HC62 589 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 MAD2L2Q9UI95 211 aa20.17■□□□□ 0.82
CTNNA1-206ENST00000517980 CYP21A2P08686 494 aa20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 SUPT20HL2P0C7V6 817 aa20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 EIF2AK2P19525 551 aaKnown RBP20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 RABGGTBP53611 331 aa20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 RPUSD2Q8IZ73 545 aaKnown RBP20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 PRDM12Q9H4Q4 367 aa20.16■□□□□ 0.82
CTNNA1-206ENST00000517980 OPLAHO14841 1288 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 KPNA6O60684 536 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 PPP1R11O60927 126 aaPredicted RBP20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 TRDNQ13061 729 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 STXBP2Q15833 593 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 RUFY2Q8WXA3 655 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 PPM1EQ8WY54 764 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 NKX2-4Q9H2Z4 354 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 MSRAQ9UJ68 235 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 RAD50Q92878 1312 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 TET1Q8NFU7 2136 aa20.15■□□□□ 0.82
CTNNA1-206ENST00000517980 PALM3A6NDB9 673 aaPredicted RBP20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 ZBBXA8MT70 800 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 RBAK-RBAKDNI3L0D1 243 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 IFIT3O14879 490 aaKnown RBP20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 NR3C2P08235 984 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 MYOGP15173 224 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 ARHGAP1Q07960 439 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 SLC35G1Q2M3R5 365 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 USP38Q8NB14 1042 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 ZFP91Q96JP5 570 aaPredicted RBP20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 AMNQ9BXJ7 453 aa20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 YBX2Q9Y2T7 364 aaKnown RBP20.14■□□□□ 0.81
CTNNA1-206ENST00000517980 SORBS3O60504 671 aa20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 GH1P01241 217 aa20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 MYCLP12524 364 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 HOXA13P31271 388 aaPredicted RBP20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 NFRKBQ6P4R8 1299 aa20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 MTMR8Q96EF0 704 aa20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 MTIF3Q9H2K0 278 aaKnown RBP20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
CTNNA1-206ENST00000517980 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms