RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 C11orf49Q9H6J7 331 aa16.78■□□□□ 0.28
TOP1MT-203ENST00000517857 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
TOP1MT-203ENST00000517857 hCG_1984214I3L0E3 225 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 PPFIA3O75145 1194 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 PGK1P00558 417 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 TNFAIP2Q03169 654 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 ZNF713Q8N859 430 aaPredicted RBP16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 PHKBQ93100 1093 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 IL17RAQ96F46 866 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 HTATIP2Q9BUP3 242 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 SPC25Q9HBM1 224 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 PDGFCQ9NRA1 345 aa16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 RBM27Q9P2N5 1060 aaKnown RBP16.77■□□□□ 0.28
TOP1MT-203ENST00000517857 BRCA2P51587 3418 aa16.77■□□□□ 0.27
TOP1MT-203ENST00000517857 SYNRGQ9UMZ2 1314 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 DNM1LO00429 736 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 DUSP11O75319 330 aaKnown RBP16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 MYCLP12524 364 aaPredicted RBP16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 EDNRBP24530 442 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 LRRC41Q15345 812 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 PPP1R18Q6NYC8 613 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 UBE2Q1Q7Z7E8 422 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 RNF180Q86T96 592 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 TRIM22Q8IYM9 498 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 ALDH8A1Q9H2A2 487 aaPredicted RBP16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 PSTPIP2Q9H939 334 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 ALPK3Q96L96 1907 aa16.76■□□□□ 0.27
TOP1MT-203ENST00000517857 ADCY6O43306 1168 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 NR3C2P08235 984 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 C6orf222P0C671 652 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 SCG2P13521 617 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 IFNAR1P17181 557 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 MNX1P50219 401 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 ADCY7P51828 1080 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 STXBP2Q15833 593 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 UBE2SQ16763 222 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 PFKFB3Q16875 520 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 TAPT1Q6NXT6 567 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 RNF26Q9BY78 433 aaPredicted RBP16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 TPCN1Q9ULQ1 816 aa16.75■□□□□ 0.27
TOP1MT-203ENST00000517857 STXBP3O00186 592 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 PRPF3O43395 683 aaKnown RBP16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 SMPD1P17405 629 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 CCND2P30279 289 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 PGM5Q15124 567 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 NTRK3Q16288 839 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 TLK2Q86UE8 772 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 SCFD2Q8WU76 684 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 DPF3Q92784 378 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 BARHL2Q9NY43 387 aa16.74■□□□□ 0.27
TOP1MT-203ENST00000517857 SPDYE3A6NKU9 549 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 PIK3CDO00329 1044 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 MEIS2O14770 477 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 ADAMTS4O75173 837 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 CDKL5O76039 1030 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 SCRN1Q12765 414 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 TYW1BQ6NUM6 668 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 CCDC12Q8WUD4 166 aaPredicted RBP16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 SENP6Q9GZR1 1112 aaPredicted RBP16.73■□□□□ 0.27
TOP1MT-203ENST00000517857 PDE4DIPQ5VU43 2346 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 MYADML2A6NDP7 307 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 PFKFB2O60825 505 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 PTGS1P23219 599 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 CCDC148Q8NFR7 591 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 FERMT2Q96AC1 680 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 RIC8AQ9NPQ8 531 aa16.72■□□□□ 0.27
TOP1MT-203ENST00000517857 FRMPD4Q14CM0 1322 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 RBM47A0AV96 593 aaKnown RBP16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 LARGE1O95461 756 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 COL6A1P12109 1028 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 GJA9P57773 515 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 BEX3Q00994 111 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 PKN1Q16512 942 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 DUSP28Q4G0W2 176 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 GNASQ5JWF2 1037 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
TOP1MT-203ENST00000517857 ZFP91Q96JP5 570 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms