RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 POLR2MP0CAP2 368 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 EIF2AK2P19525 551 aaKnown RBP24.38■■□□□ 1.49
MTCL1-204ENST00000517554 CCT2P78371 535 aaKnown RBP24.38■■□□□ 1.49
MTCL1-204ENST00000517554 TNFAIP2Q03169 654 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 PDE4DQ08499 809 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 WWC2Q6AWC2 1192 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 SAMD3Q8N6K7 520 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 KLHDC9Q8NEP7 349 aa24.38■■□□□ 1.49
MTCL1-204ENST00000517554 RBM47A0AV96 593 aaKnown RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 MYCNP04198 464 aaPredicted RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 USP17L6PQ6QN14 398 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 IL31RAQ8NI17 732 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 ALDH8A1Q9H2A2 487 aaPredicted RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 EIF5BO60841 1220 aaKnown RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 PPFIA3O75145 1194 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 ARHGEF16Q5VV41 709 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 IQSEC1Q6DN90 963 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 CCSAPQ6IQ19 270 aaPredicted RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 HEATR3Q7Z4Q2 680 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 FCHSD1Q86WN1 690 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 ZNF274Q96GC6 653 aaPredicted RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 PDCD2LQ9BRP1 358 aa24.37■■□□□ 1.49
MTCL1-204ENST00000517554 UPF3AQ9H1J1 476 aaKnown RBP24.37■■□□□ 1.49
MTCL1-204ENST00000517554 CCDC196A0A1B0GTZ2 297 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 NR3C2P08235 984 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 GJA9P57773 515 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 PDE4DIPQ5VU43 2346 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 PHKBQ93100 1093 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 IWS1Q96ST2 819 aa24.36■■□□□ 1.49
MTCL1-204ENST00000517554 SENP6Q9GZR1 1112 aaPredicted RBP24.36■■□□□ 1.49
MTCL1-204ENST00000517554 ALPK3Q96L96 1907 aa24.35■■□□□ 1.49
MTCL1-204ENST00000517554 PIK3CDO00329 1044 aa24.35■■□□□ 1.49
MTCL1-204ENST00000517554 PKN1Q16512 942 aa24.35■■□□□ 1.49
MTCL1-204ENST00000517554 HTATIP2Q9BUP3 242 aa24.35■■□□□ 1.49
MTCL1-204ENST00000517554 STXBP3O00186 592 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 ARIH2O95376 493 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 AK2P54819 239 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 NKX3-2P78367 333 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 PGM5Q15124 567 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 LRRC26Q2I0M4 334 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 RNF180Q86T96 592 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 KIF2CQ99661 725 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 WDR11Q9BZH6 1224 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 TPCN1Q9ULQ1 816 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 DNAH12Q6ZR08 3092 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 FRMPD4Q14CM0 1322 aa24.34■■□□□ 1.49
MTCL1-204ENST00000517554 KBTBD13C9JR72 458 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 RGS20O76081 388 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 STXBP2Q15833 593 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 DUSP28Q4G0W2 176 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 DPF3Q92784 378 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 FERMT2Q96AC1 680 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 ZFP91Q96JP5 570 aaPredicted RBP24.33■■□□□ 1.49
MTCL1-204ENST00000517554 MPHOSPH6Q99547 160 aaKnown RBP24.33■■□□□ 1.49
MTCL1-204ENST00000517554 PSTPIP2Q9H939 334 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 PHF24Q9UPV7 400 aa24.33■■□□□ 1.49
MTCL1-204ENST00000517554 B4DLN1 442 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 PRPF3O43395 683 aaKnown RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 C6orf222P0C671 652 aaPredicted RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 IFNAR1P17181 557 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 CST5P28325 142 aaPredicted RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 MRPL12P52815 198 aaKnown RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 BEX3Q00994 111 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 STK3Q13188 491 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 KCNA10Q16322 511 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 UBE2SQ16763 222 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 PFKFB3Q16875 520 aaPredicted RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 NOL8Q76FK4 1167 aaKnown RBP24.33■■□□□ 1.48
MTCL1-204ENST00000517554 TLK2Q86UE8 772 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 VSIG10LQ86VR7 867 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 BARHL2Q9NY43 387 aa24.33■■□□□ 1.48
MTCL1-204ENST00000517554 DYNC1LI2O43237 492 aaPredicted RBP24.32■■□□□ 1.48
MTCL1-204ENST00000517554 CCDC62Q6P9F0 684 aa24.32■■□□□ 1.48
MTCL1-204ENST00000517554 COPS5Q92905 334 aa24.32■■□□□ 1.48
MTCL1-204ENST00000517554 EIF3JO75822 258 aaKnown RBP24.31■■□□□ 1.48
MTCL1-204ENST00000517554 MYCLP12524 364 aaPredicted RBP24.31■■□□□ 1.48
MTCL1-204ENST00000517554 ATN1P54259 1190 aaPredicted RBP24.31■■□□□ 1.48
MTCL1-204ENST00000517554 SEPT14Q6ZU15 432 aa24.31■■□□□ 1.48
MTCL1-204ENST00000517554 SMARCC2Q8TAQ2 1214 aa24.31■■□□□ 1.48
MTCL1-204ENST00000517554 SCFD2Q8WU76 684 aa24.31■■□□□ 1.48
MTCL1-204ENST00000517554 Q9Y3F1 56 aa24.31■■□□□ 1.48
MTCL1-204ENST00000517554 ADAMTS3O15072 1205 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 SCG2P13521 617 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 NEK4P51957 841 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 ACLYP53396 1101 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 NAPAP54920 295 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 MRPS9P82933 396 aaKnown RBP24.3■■□□□ 1.48
MTCL1-204ENST00000517554 SCRN1Q12765 414 aa24.3■■□□□ 1.48
MTCL1-204ENST00000517554 TSEN34Q9BSV6 310 aaKnown RBP24.3■■□□□ 1.48
MTCL1-204ENST00000517554 A0A1W2PQ45 241 aaPredicted RBP24.29■■□□□ 1.48
MTCL1-204ENST00000517554 A0A1W2PQY0 241 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 DTNBO60941 627 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 GNASQ5JWF2 1037 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 SLC39A5Q6ZMH5 540 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 SLC26A6Q9BXS9 759 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 RNF26Q9BY78 433 aaPredicted RBP24.29■■□□□ 1.48
MTCL1-204ENST00000517554 PCDH10Q9P2E7 1040 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 hCG_1984214I3L0E3 225 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 LARGE1O95461 756 aa24.29■■□□□ 1.48
MTCL1-204ENST00000517554 ASGR1P07306 291 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms