RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 MTMR6Q9Y217 621 aa11.34□□□□□ -0.59
CLN8-202ENST00000517514 ZDHHC9Q9Y397 364 aa11.34□□□□□ -0.59
CLN8-202ENST00000517514 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
CLN8-202ENST00000517514 DOCK5Q9H7D0 1870 aa11.34□□□□□ -0.59
CLN8-202ENST00000517514 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
CLN8-202ENST00000517514 GNA11P29992 359 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 ALDH5A1P51649 535 aaPredicted RBP11.33□□□□□ -0.6
CLN8-202ENST00000517514 UBXN2AP68543 259 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 IRF5Q13568 498 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 KIF22Q14807 665 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 TEX2Q8IWB9 1127 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
CLN8-202ENST00000517514 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
CLN8-202ENST00000517514 TRIB2Q92519 343 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 KATNBL1Q9H079 304 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
CLN8-202ENST00000517514 DIS3Q9Y2L1 958 aaKnown RBP11.33□□□□□ -0.6
CLN8-202ENST00000517514 GNRH1P01148 92 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
CLN8-202ENST00000517514 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLN8-202ENST00000517514 KRT2P35908 639 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 SREBF1P36956 1147 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 RGS2P41220 211 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
CLN8-202ENST00000517514 TRIM32Q13049 653 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 PGM5Q15124 567 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 MAMDC4Q6UXC1 1216 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
CLN8-202ENST00000517514 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
CLN8-202ENST00000517514 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 APBA2Q99767 749 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 PTCH2Q9Y6C5 1203 aa11.32□□□□□ -0.6
CLN8-202ENST00000517514 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 STX6O43752 255 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 RGS20O76081 388 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 NR3C2P08235 984 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 ELNP15502 786 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 XBP1P17861 261 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
CLN8-202ENST00000517514 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
CLN8-202ENST00000517514 RESTQ13127 1097 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 TRIM29Q14134 588 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 OLFML2BQ68BL8 750 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 VSIG10LQ86VR7 867 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 FOXP1Q9H334 677 aaPredicted RBP11.31□□□□□ -0.6
CLN8-202ENST00000517514 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
CLN8-202ENST00000517514 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 TCHHQ07283 1943 aa11.31□□□□□ -0.6
CLN8-202ENST00000517514 BRCA2P51587 3418 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
CLN8-202ENST00000517514 BRD1O95696 1058 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 FOSP01100 380 aaPredicted RBP11.3□□□□□ -0.6
CLN8-202ENST00000517514 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
CLN8-202ENST00000517514 CYP2C19P33261 490 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 ARHGAP4P98171 946 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 INF2Q27J81 1249 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 ARMCX2Q7L311 632 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 FERMT3Q86UX7 667 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
CLN8-202ENST00000517514 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 LENG9Q96B70 501 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
CLN8-202ENST00000517514 TINF2Q9BSI4 451 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 PRDM10Q9NQV6 1147 aa11.3□□□□□ -0.6
CLN8-202ENST00000517514 IGLV3-22A0A075B6J6 115 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 FAM86B1E9PN63 330 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 ADCY6O43306 1168 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 ADCY3O60266 1144 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 CYP3A4P08684 503 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 FAM86B2P0C5J1 330 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 ZNF865P0CJ78 1059 aaPredicted RBP11.29□□□□□ -0.6
CLN8-202ENST00000517514 ITGB5P18084 799 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 PDCP20941 246 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 HOXD10P28358 340 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 PRMT2P55345 433 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLN8-202ENST00000517514 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
CLN8-202ENST00000517514 PRAMEF19Q5SWL8 479 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 ARHGEF16Q5VV41 709 aa11.29□□□□□ -0.6
CLN8-202ENST00000517514 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms