RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ADSSL1Q8N142 457 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC63Q8NA47 563 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TRIM31Q9BZY9 425 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 AMFRQ9UKV5 643 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PLAAQ9Y263 795 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 MON2Q7Z3U7 1717 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 C3P01024 1663 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PLEKHA8P1O95397 391 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 EPB41P11171 864 aaKnown RBP7.33□□□□□ -1.24
CPNE3-203ENST00000517490 C10orf76Q5T2E6 689 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 BICDL1Q6ZP65 573 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 NEK8Q86SG6 692 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 DNAJC7Q99615 494 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 ISCA1Q9BUE6 129 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 PHF20Q9BVI0 1012 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 MLXIPQ9HAP2 919 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 SH3GLB2Q9NR46 395 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 TSPOAP1O95153 1857 aa7.33□□□□□ -1.24
CPNE3-203ENST00000517490 A0A1W2PRG0 241 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PGRMC1O00264 195 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF185O15231 689 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 HMGB2P26583 209 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 TECP42680 631 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 TFAP4Q01664 338 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 SEL1L2Q5TEA6 688 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 NFRKBQ6P4R8 1299 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 KLC4Q9NSK0 619 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 GMNCA6NCL1 334 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 EXOC5O00471 708 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 CALUO43852 315 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 CD44P16070 742 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 TOB1P50616 345 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 EIF3BP55884 814 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 LRRC63Q05C16 580 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 RASGRF1Q13972 1273 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 DCAF17Q5H9S7 520 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ANKRD13AQ8IZ07 590 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 KCNK9Q9NPC2 374 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 NKIRAS1Q9NYS0 192 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 STK17AQ9UEE5 414 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 CYP27B1O15528 508 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 FTCDO95954 541 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 GBP1P32455 592 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 SARNPP82979 210 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 TRIM28Q13263 835 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 LMNTD2Q8IXW0 634 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 UBL4BQ8N7F7 174 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 NT5C3AQ9H0P0 336 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 SENP2Q9HC62 589 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 HOMER3Q9NSC5 361 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ANKIB1Q9P2G1 1089 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PDS5AQ29RF7 1337 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PNPLA7Q6ZV29 1317 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 SMCO2A6NFE2 343 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ZPR1O75312 459 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 H2AFZP0C0S5 128 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PLCG1P19174 1290 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ERCC3P19447 782 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 MRPS25P82663 173 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 NTRK3Q16288 839 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 HERC4Q5GLZ8 1057 aaPredicted RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 H2AFVQ71UI9 128 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 INTS8Q75QN2 995 aaKnown RBP7.32□□□□□ -1.24
CPNE3-203ENST00000517490 NLRP10Q86W26 655 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 PLA2G12BQ9BX93 195 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 EDEM3Q9BZQ6 932 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 ANKRD2Q9GZV1 360 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 AXIN2Q9Y2T1 843 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 STK24Q9Y6E0 443 aa7.32□□□□□ -1.24
CPNE3-203ENST00000517490 POTEJP0CG39 1038 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 MDH1P40925 334 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC6Q16204 474 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PFKFB3Q16875 520 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC25Q86WR0 208 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF473Q8WTR7 871 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 A0A1W2PQJ5 194 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CCDC188H7C350 402 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 TNFAIP3P21580 790 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ALDH3A1P30838 453 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 NT5C2P49902 561 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ADCY7P51828 1080 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 MRPL12P52815 198 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 FKBP3Q00688 224 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PPARDQ03181 441 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PSMD2Q13200 908 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 E2F5Q15329 346 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CCHCR1Q8TD31 782 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 LARP4BQ92615 738 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ZNF622Q969S3 477 aaKnown RBP eCLIP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms