RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 GJA9P57773 515 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 STXBP2Q15833 593 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 RNF180Q86T96 592 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 VSIG10LQ86VR7 867 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 FBXO16Q8IX29 292 aaPredicted RBP12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 DPF3Q92784 378 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
SCARNA20-201ENST00000516768 NID2Q14112 1375 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 KBTBD13C9JR72 458 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 IFNAR1P17181 557 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 KCNA10Q16322 511 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 DUSP28Q4G0W2 176 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 TMEM63BQ5T3F8 832 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 LENG1Q96BZ8 264 aaPredicted RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 UPF3AQ9H1J1 476 aaKnown RBP12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 MYH6P13533 1939 aa12.85□□□□□ -0.35
SCARNA20-201ENST00000516768 MCM3APO60318 1980 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 CTAGE5O15320 804 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 TNRC18O15417 2968 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 DYNC1LI2O43237 492 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 NEK4P51957 841 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 PGM5Q15124 567 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 PKN1Q16512 942 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 HEATR3Q7Z4Q2 680 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 TEX2Q8IWB9 1127 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 SMARCC2Q8TAQ2 1214 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 GPKOWQ92917 476 aaPredicted RBP eCLIP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 CUL5Q93034 780 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
SCARNA20-201ENST00000516768 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 EVI5O60447 810 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 TXNP10599 105 aaKnown RBP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 SCG2P13521 617 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 AK2P54819 239 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 SLC39A5Q6ZMH5 540 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 PCSK9Q8NBP7 692 aaKnown RBP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 RNF26Q9BY78 433 aaPredicted RBP12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 TPCN1Q9ULQ1 816 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 PDE4DIPQ5VU43 2346 aa12.83□□□□□ -0.36
SCARNA20-201ENST00000516768 LCTP09848 1927 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 MYADML2A6NDP7 307 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 STXBP3O00186 592 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 RGS20O76081 388 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 ACLYP53396 1101 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 NAPAP54920 295 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 STK3Q13188 491 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 TTLL4Q14679 1199 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 LRRC26Q2I0M4 334 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 SEPT14Q6ZU15 432 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 PHKBQ93100 1093 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 KIF2CQ99661 725 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 NR2E3Q9Y5X4 410 aa12.82□□□□□ -0.36
SCARNA20-201ENST00000516768 CPLX1O14810 134 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 PFKFB2O60825 505 aa12.81□□□□□ -0.36
SCARNA20-201ENST00000516768 STAM2O75886 525 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms