RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 FHOD1Q9Y613 1164 aa4.09□□□□□ -1.75
RNU2-53P-201ENST00000516257 DDX3XO00571 662 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZBTB7AO95365 584 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF16P17020 682 aaPredicted RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 MCM4P33991 863 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 PMS1P54277 932 aaKnown RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 R3HDM1Q15032 1099 aaKnown RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 SPDYAQ5MJ70 313 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 PRR31Q5SQ13 230 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 WWC2Q6AWC2 1192 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 REXO1Q8N1G1 1221 aaKnown RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 KYQ8NBH2 561 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 DNERQ8NFT8 737 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF296Q8WUU4 475 aaPredicted RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 NOL6Q9H6R4 1146 aaKnown RBP4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 FAM86C1Q9NVL1 165 aa4.08□□□□□ -1.76
RNU2-53P-201ENST00000516257 SORBS3O60504 671 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 CD247P20963 164 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 POU4F1Q01851 419 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 LRRFIP1Q32MZ4 808 aaKnown RBP4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF326Q5BKZ1 582 aaKnown RBP4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 RCSD1Q6JBY9 416 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 IGDCC4Q8TDY8 1250 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 GIPC2Q8TF65 315 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 MRRFQ96E11 262 aaKnown RBP4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 LCORQ96JN0 433 aaPredicted RBP4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 DHRS1Q96LJ7 313 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 WWC2-AS2Q96NR7 200 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 VTI1BQ9UEU0 232 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 ADAMTS1Q9UHI8 967 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF451Q9Y4E5 1061 aa4.07□□□□□ -1.76
RNU2-53P-201ENST00000516257 NPEPPSL1A6NEC2 478 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 TP53P04637 393 aaPredicted RBP4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 SELENOPP49908 381 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 ITGA1P56199 1179 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 PPP2R5DQ14738 602 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 SURF1Q15526 300 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 ANKRD39Q53RE8 183 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 ETV3LQ6ZN32 361 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 CIR1Q86X95 450 aaPredicted RBP4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 CPNE8Q86YQ8 564 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 PTPN18Q99952 460 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 DEF6Q9H4E7 631 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 C11orf21Q9P2W6 132 aa4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 SF3B6Q9Y3B4 125 aaKnown RBP4.06□□□□□ -1.76
RNU2-53P-201ENST00000516257 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 STXBP3O00186 592 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 MUSKO15146 869 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 NTRK1P04629 796 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF165P49910 485 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 APOBRQ0VD83 1088 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 FHL2Q14192 279 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 CD300LDQ6UXZ3 194 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 FBXO33Q7Z6M2 555 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 SMARCC1Q92922 1105 aaPredicted RBP4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 MBD6Q96DN6 1003 aa4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 KIAA1522Q9P206 1035 aaPredicted RBP4.05□□□□□ -1.76
RNU2-53P-201ENST00000516257 C9orf118A6NHY6 69 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 NPIPB8E9PQR5 432 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 AURKAO14965 403 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 ITGA4P13612 1032 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF28P17035 718 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 VAMP1P23763 118 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 TAGLNQ01995 201 aaKnown RBP4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZYXQ15942 572 aaKnown RBP4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 EEF1DP3Q658K8 133 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 INTS3Q68E01 1043 aaKnown RBP4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 PLEKHH3Q7Z736 793 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 MIB1Q86YT6 1006 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 TTLL6Q8N841 843 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 USP33Q8TEY7 942 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 ZNF341Q9BYN7 854 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 BCL11AQ9H165 835 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 PCDH18Q9HCL0 1135 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 IGSF5Q9NSI5 407 aa4.04□□□□□ -1.76
RNU2-53P-201ENST00000516257 PATE3B3GLJ2 98 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 CBFA2T2O43439 604 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 VAMP4O75379 141 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 FUCA1P04066 466 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 CYP1A1P04798 512 aaPredicted RBP4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 EPHB4P54760 987 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 TGFB2P61812 414 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 ADAM9Q13443 819 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 SMN1Q16637 294 aaKnown RBP4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 DPY19L1Q2PZI1 675 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 PRAMEF18Q5VWM3 479 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 IGFL4Q6B9Z1 124 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 SLITRK4Q8IW52 837 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 ADCY4Q8NFM4 1077 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 NKD1Q969G9 470 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 MRS2Q9HD23 443 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 TCAF1Q9Y4C2 921 aa4.03□□□□□ -1.76
RNU2-53P-201ENST00000516257 SGSM2O43147 1006 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 ZNF623O75123 536 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 STAT5AP42229 794 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 PPP2CBP62714 309 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 PPP2CAP67775 309 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 PKN3Q6P5Z2 889 aa4.02□□□□□ -1.77
RNU2-53P-201ENST00000516257 DCP2Q8IU60 420 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms