RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 TRMT112Q9UI30 125 aaKnown RBP3.47□□□□□ -1.85
RN7SKP43-201ENST00000516173 NAP1L2Q9ULW6 460 aaPredicted RBP3.47□□□□□ -1.85
RN7SKP43-201ENST00000516173 ZNF652Q9Y2D9 606 aa3.47□□□□□ -1.85
RN7SKP43-201ENST00000516173 CLIC4Q9Y696 253 aa3.47□□□□□ -1.85
RN7SKP43-201ENST00000516173 V9GYY5 206 aaPredicted RBP3.47□□□□□ -1.85
RN7SKP43-201ENST00000516173 ZNF532Q9HCE3 1301 aa3.46□□□□□ -1.85
RN7SKP43-201ENST00000516173 LAMB1P07942 1786 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 MYH14Q7Z406 1995 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LRP5O75197 1615 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 A0A1W2PNR3 127 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 GSG1L2A8MUP6 293 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LAD1O00515 517 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ORC4O43929 436 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 WDHD1O75717 1129 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 IDH1O75874 414 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DDAH1O94760 285 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SLFN14P0C7P3 912 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 TOP1P11387 765 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZSCAN20P17040 1043 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CDK11BP21127 795 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CALML3P27482 149 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 GNAQP50148 359 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CTDSPL2Q05D32 466 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DMTNQ08495 405 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LRMPQ12912 555 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 TBX2Q13207 712 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ORC2Q13416 577 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 TRIM14Q14142 442 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 MORC3Q14149 939 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 NR1I3Q14994 352 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SF3B3Q15393 1217 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZNF124Q15973 351 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 RTN1Q16799 776 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DPCR1Q3MIW9 517 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CCDC144BQ3MJ40 725 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SBK1Q52WX2 424 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CAVIN4Q5BKX8 364 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZNF648Q5T619 568 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SPATA1Q5VX52 437 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SPTY2D1Q68D10 685 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SPECC1LQ69YQ0 1117 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 TTLL5Q6EMB2 1281 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SHC4Q6S5L8 630 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ARHGAP27Q6ZUM4 889 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 C11orf57Q6ZUT1 292 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CATIPQ7Z7H3 387 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DGKHQ86XP1 1220 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 VSTM4Q8IW00 320 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DNAJC10Q8IXB1 793 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CCDC144CPQ8IYA2 1237 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 KRT222Q8N1A0 295 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 AOPEPQ8N6M6 819 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 IQUBQ8NA54 791 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ANKRD20A12PQ8NF67 263 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LRRN4Q8WUT4 740 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 HNRNPLLQ8WVV9 542 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 UBXN4Q92575 508 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ANKS1AQ92625 1134 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 JARID2Q92833 1246 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 SMARCE1Q969G3 411 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 C16orf45Q96MC5 204 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LZTS2Q9BRK4 669 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 UBAC1Q9BSL1 405 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 LRRC2Q9BYS8 371 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ANKRD2Q9GZV1 360 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 CUEDC2Q9H467 287 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 GREM2Q9H772 168 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZNF287Q9HBT7 754 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 NCOA5Q9HCD5 579 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ATP8A2Q9NTI2 1148 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 BSDC1Q9NW68 430 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 RMND1Q9NWS8 449 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 AATFQ9NY61 560 aaKnown RBP eCLIP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 IFNKQ9P0W0 207 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 DENND2AQ9ULE3 1009 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ASAP1Q9ULH1 1129 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 PCDHA5Q9Y5H7 936 aa3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 COL5A3P25940 1745 aaPredicted RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.46□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZNF804BA4D1E1 1349 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 NEDD4P46934 1319 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 ITIH6Q6UXX5 1313 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 UBN2Q6ZU65 1347 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 MYH10P35580 1976 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 DISP2A7MBM2 1401 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 A0A0U1RQG5 324 aaPredicted RBP3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 CCDC66A2RUB6 948 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 TRIM75PA6NK02 468 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 GOLGA8AA7E2F4 631 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 B4E1Z4 1266 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 H7C1D1 291 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 EFSO43281 561 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 CCDC175P0C221 793 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 H2AFXP16104 143 aaPredicted RBP3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 ZNF18P17022 549 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 MCM3P25205 808 aa3.45□□□□□ -1.86
RN7SKP43-201ENST00000516173 LMOD1P29536 600 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms