RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 RAB34Q9BZG1 259 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ZNF408Q9H9D4 720 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HOXC10Q9NYD6 342 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SERTAD1Q9UHV2 236 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ADAMTS5Q9UNA0 930 aa8.64□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NFIBO00712 420 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CYP3A4P08684 503 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SLFN14P0C7P3 912 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 XRCC6P12956 609 aaKnown RBP eCLIP8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TECP42680 631 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FXR2P51116 673 aaKnown RBP eCLIP8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HSD17B4P51659 736 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FKBP1BP68106 108 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 GHRHRQ02643 423 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TREML2Q5T2D2 321 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SNRNP48Q6IEG0 339 aaKnown RBP8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CABP7Q86V35 215 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 IQUBQ8NA54 791 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RNF214Q8ND24 703 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 REPS2Q8NFH8 660 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RASSF8Q8NHQ8 419 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CLEC4DQ8WXI8 215 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 OPTNQ96CV9 577 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SLC10A4Q96EP9 437 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TRERF1Q96PN7 1200 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CCSER1Q9C0I3 900 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HOMER2Q9NSB8 354 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RNF146Q9NTX7 359 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ANO10Q9NW15 660 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MAP3K20Q9NYL2 800 aaKnown RBP8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KCNH4Q9UQ05 1017 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
SCARNA20.1-201ENST00000516009 A0A087X0B3 334 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PP2D1A8MPX8 630 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ATP2A1O14983 1001 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TBX3O15119 743 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CAVIN2O95810 425 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HOXA7P31268 230 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CIITAP33076 1130 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 STAT6P42226 847 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PABPC4Q13310 644 aaKnown RBP eCLIP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PNOCQ13519 176 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PDIA5Q14554 519 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TMEM132BQ14DG7 1078 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KARSQ15046 597 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 POSTNQ15063 836 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TKFCQ3LXA3 575 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 Q4G0T1 1027 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ANO6Q4KMQ2 910 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PRR16Q569H4 304 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MUM1L1Q5H9M0 696 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FASTKD5Q7L8L6 764 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SLFN12Q8IYM2 578 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 IGSF22Q8N9C0 903 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ERCC4Q92889 916 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 WNK4Q96J92 1243 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TEX13BQ9BXU2 312 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TTC12Q9H892 705 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KCNMB3Q9NPA1 279 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 LRWD1Q9UFC0 647 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 TUBE1Q9UJT0 475 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ZNF214Q9UL59 606 aaPredicted RBP8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PCDHA12Q9UN75 941 aa8.62□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FAM86B1E9PN63 330 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FOXN1O15353 648 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SMC2O95347 1197 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FAM86B2P0C5J1 330 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CDC25AP30304 524 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 STAT3P40763 770 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NLRP12P59046 1061 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RPS6P62753 249 aaKnown RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SNAPC2Q13487 334 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PLS1Q14651 629 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 E2F4Q16254 413 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 UVSSAQ2YD98 709 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RRAGBQ5VZM2 374 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 KRT79Q5XKE5 535 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PDXDC2PQ6P474 469 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 NSMFQ6X4W1 530 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 RNF207Q6ZRF8 634 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MB21D1Q8N884 522 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 C2orf69Q8N8R5 385 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FAM200AQ8TCP9 573 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SYTL5Q8TDW5 730 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 HAS1Q92839 578 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 SMARCE1Q969G3 411 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CALML4Q96GE6 196 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 PAGE5Q96GU1 130 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 CDK5RAP3Q96JB5 506 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 FAM20AQ96MK3 541 aa8.61□□□□□ -1.03
SCARNA20.1-201ENST00000516009 MAF1Q9H063 256 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms