RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 HSD17B4P51659 736 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 PSMC6P62333 389 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 Q7L0L9 218 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 IWS1Q96ST2 819 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 POLR3EQ9NVU0 708 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 PCDHA1Q9Y5I3 950 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 SLC27A2O14975 620 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 PRC1O43663 620 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 CYTH3O43739 400 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 GHRHRQ02643 423 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 TTLL4Q14679 1199 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 MFSD5Q6N075 450 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 PIGSQ96S52 555 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 MTA3Q9BTC8 594 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 LY9Q9HBG7 655 aa22.71■■□□□ 1.23
DDR1-280ENST00000515881 ARIH2O95376 493 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 PURAQ00577 322 aaKnown RBP22.7■■□□□ 1.22
DDR1-280ENST00000515881 TRAF1Q13077 416 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 NECTIN1Q15223 517 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 STXBP2Q15833 593 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 BRDTQ58F21 947 aaPredicted RBP22.7■■□□□ 1.22
DDR1-280ENST00000515881 ARHGEF16Q5VV41 709 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 CREB3L3Q68CJ9 461 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 CASC1Q6TDU7 716 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 COPS5Q92905 334 aa22.7■■□□□ 1.22
DDR1-280ENST00000515881 GPHNQ9NQX3 736 aaPredicted RBP22.7■■□□□ 1.22
DDR1-280ENST00000515881 MAP3K20Q9NYL2 800 aaKnown RBP22.7■■□□□ 1.22
DDR1-280ENST00000515881 DDAH1O94760 285 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 MYL3P08590 195 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 EIF2AK2P19525 551 aaKnown RBP22.69■■□□□ 1.22
DDR1-280ENST00000515881 MCM5P33992 734 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 CCDC62Q6P9F0 684 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 SEPT14Q6ZU15 432 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 ZNF654Q8IZM8 581 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 RNPC3Q96LT9 517 aaKnown RBP22.69■■□□□ 1.22
DDR1-280ENST00000515881 MAP3K14Q99558 947 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 PPP1R12CQ9BZL4 782 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 PXMP2Q9NR77 195 aa22.69■■□□□ 1.22
DDR1-280ENST00000515881 PNMA6FA0A0J9YX94 578 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 A6NJR5 290 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 FAM109BQ6ICB4 259 aaPredicted RBP22.68■■□□□ 1.22
DDR1-280ENST00000515881 SAMD3Q8N6K7 520 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 TMEM87BQ96K49 555 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 MTG1Q9BT17 334 aaPredicted RBP22.68■■□□□ 1.22
DDR1-280ENST00000515881 MYL10Q9BUA6 226 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 TRPV6Q9H1D0 765 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 MTMR10Q9NXD2 777 aa22.68■■□□□ 1.22
DDR1-280ENST00000515881 SH2B2O14492 632 aaPredicted RBP22.67■■□□□ 1.22
DDR1-280ENST00000515881 B4GALT4O60513 344 aa22.67■■□□□ 1.22
DDR1-280ENST00000515881 KPNA6O60684 536 aa22.67■■□□□ 1.22
DDR1-280ENST00000515881 NR3C2P08235 984 aa22.67■■□□□ 1.22
DDR1-280ENST00000515881 PPIGQ13427 754 aaKnown RBP eCLIP22.67■■□□□ 1.222e-11■■■□□ 16.7
DDR1-280ENST00000515881 COL9A3Q14050 684 aaPredicted RBP22.67■■□□□ 1.22
DDR1-280ENST00000515881 TMEM199Q8N511 208 aa22.67■■□□□ 1.22
DDR1-280ENST00000515881 CTCFLQ8NI51 663 aaPredicted RBP22.67■■□□□ 1.22
DDR1-280ENST00000515881 EIF3JO75822 258 aaKnown RBP22.66■■□□□ 1.22
DDR1-280ENST00000515881 CSF2RAP15509 400 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 HOXA13P31271 388 aaPredicted RBP22.66■■□□□ 1.22
DDR1-280ENST00000515881 KIF5BP33176 963 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 SMAD3P84022 425 aaKnown RBP22.66■■□□□ 1.22
DDR1-280ENST00000515881 LY6KQ17RY6 165 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 NFXL1Q6ZNB6 911 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 TMTC2Q8N394 836 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 PDCD2LQ9BRP1 358 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 ALDH8A1Q9H2A2 487 aaPredicted RBP22.66■■□□□ 1.22
DDR1-280ENST00000515881 HIPK3Q9H422 1215 aa22.66■■□□□ 1.22
DDR1-280ENST00000515881 CCDC69A6NI79 296 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 GCOM1H8Y6P7 765 aaPredicted RBP22.65■■□□□ 1.22
DDR1-280ENST00000515881 GH1P01241 217 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 POLR2MP0CAP2 368 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 CYP2C18P33260 490 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 PIBF1Q8WXW3 757 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.65■■□□□ 1.223e-7■□□□□ 11.3
DDR1-280ENST00000515881 SPZ1Q9BXG8 430 aa22.65■■□□□ 1.22
DDR1-280ENST00000515881 CDC45O75419 566 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 LIFRP42702 1097 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 ARHGAP1Q07960 439 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 RNF20Q5VTR2 975 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 C16orf59Q7L2K0 433 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 AFG1LQ8WV93 481 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 LZTS2Q9BRK4 669 aa22.64■■□□□ 1.21
DDR1-280ENST00000515881 NOC4LQ9BVI4 516 aaKnown RBP22.64■■□□□ 1.21
DDR1-280ENST00000515881 UMODL1Q5DID0 1318 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 SMARCA1P28370 1054 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 PGM5Q15124 567 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 NBPF20Q3BBV1 942 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 RRP36Q96EU6 259 aaKnown RBP22.63■■□□□ 1.21
DDR1-280ENST00000515881 CCDC136Q96JN2 1154 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 TRMT13Q9NUP7 481 aaKnown RBP22.63■■□□□ 1.21
DDR1-280ENST00000515881 DDX41Q9UJV9 622 aaKnown RBP22.63■■□□□ 1.21
DDR1-280ENST00000515881 MRVI1Q9Y6F6 885 aa22.63■■□□□ 1.21
DDR1-280ENST00000515881 MMP3P08254 477 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 SUPT20HL2P0C7V6 817 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 CALM1P0DP23 149 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 CALM2P0DP24 149 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 CALM3P0DP25 149 aa22.62■■□□□ 1.21
DDR1-280ENST00000515881 MYCLP12524 364 aaPredicted RBP22.62■■□□□ 1.21
DDR1-280ENST00000515881 GNAQP50148 359 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms