RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DENND2CQ68D51 928 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 HINFPQ9BQA5 517 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 COBLO75128 1261 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 PRPSAP1Q14558 356 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 MAGEF1Q9HAY2 307 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 PDE11AQ9HCR9 933 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 ANAPC5Q9UJX4 755 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
TRIM41-207ENST00000515223 NPR1P16066 1061 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 CCND2P30279 289 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 BCAP29Q9UHQ4 241 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 ZFYVE16Q7Z3T8 1539 aa17.49■□□□□ 0.39
TRIM41-207ENST00000515223 LMNB1P20700 586 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 CMA1P23946 247 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 MORC3Q14149 939 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 BRD3Q15059 726 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 NEO1Q92859 1461 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 KIF1BO60333 1816 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 SYNJ2BP-COX16A0A087WUM0 186 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 CYP21A2P08686 494 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 INPP5BP32019 993 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 COX16Q9P0S2 106 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 ZNF233A6NK53 670 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 LAD1O00515 517 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 TRIML1Q8N9V2 468 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
TRIM41-207ENST00000515223 TRIM58Q8NG06 486 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 GSTA1P08263 222 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 GSTA2P09210 222 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
TRIM41-207ENST00000515223 ELF1P32519 619 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 GJA10Q969M2 543 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 FAM149B1Q96BN6 582 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 RILPQ96NA2 401 aa17.48■□□□□ 0.39
TRIM41-207ENST00000515223 STAT2P52630 851 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 RBBP5Q15291 538 aaKnown RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 C2orf69Q8N8R5 385 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 SPTLC3Q9NUV7 552 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 CPSF3Q9UKF6 684 aaKnown RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 ADCY8P40145 1251 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 MFAP3P55082 362 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 RYBPQ8N488 228 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 RPGRIP1Q96KN7 1286 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 H2AFZP0C0S5 128 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 GAP43P17677 238 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 CLCN6P51797 869 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 H2AFVQ71UI9 128 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 ARHGEF2Q92974 986 aaKnown RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 ATP8B3O60423 1300 aa17.47■□□□□ 0.39
TRIM41-207ENST00000515223 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-207ENST00000515223 CASQ2O14958 399 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 GDF11O95390 407 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 TSTA3Q13630 321 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 GCNAQ96QF7 691 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 SF3A3Q12874 501 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 BFSP1Q12934 665 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 KRT71Q3SY84 523 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
TRIM41-207ENST00000515223 SLC8A2Q9UPR5 921 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 FAM160B2Q86V87 743 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 CEP170P1Q96L14 293 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 FAM81BQ96LP2 452 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 KIF9Q9HAQ2 790 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
TRIM41-207ENST00000515223 BTBD18B2RXH4 712 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 RESTQ13127 1097 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 FAM182BQ5T319 152 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 PARD3BQ8TEW8 1205 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 NLRP7Q8WX94 980 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 SLC39A2Q9NP94 309 aa17.46■□□□□ 0.38
TRIM41-207ENST00000515223 PTGDRQ13258 359 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 SRGAP2BP0DMP2 458 aa17.45■□□□□ 0.38
TRIM41-207ENST00000515223 CDKL2Q92772 493 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms