RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 CCDC82Q8N4S0 544 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 SAMD3Q8N6K7 520 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 VTI1AQ96AJ9 217 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 GLT1D1Q96MS3 346 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 MAP3K20Q9NYL2 800 aaKnown RBP20.12■□□□□ 0.81
DDR1-277ENST00000515219 Q9Y3F1 56 aa20.12■□□□□ 0.81
DDR1-277ENST00000515219 RBM47A0AV96 593 aaKnown RBP20.11■□□□□ 0.81
DDR1-277ENST00000515219 GCOM1H8Y6P7 765 aaPredicted RBP20.11■□□□□ 0.81
DDR1-277ENST00000515219 CTAGE5O15320 804 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 ZBTB43O43298 467 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 POLR2MP0CAP2 368 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 EIF2AK2P19525 551 aaKnown RBP20.11■□□□□ 0.81
DDR1-277ENST00000515219 GHRHRQ02643 423 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 DUSP28Q4G0W2 176 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 HABP4Q5JVS0 413 aaKnown RBP20.11■□□□□ 0.81
DDR1-277ENST00000515219 C1orf53Q5VUE5 145 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 SCFD2Q8WU76 684 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 IWS1Q96ST2 819 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 PXMP2Q9NR77 195 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
DDR1-277ENST00000515219 KIAA1217Q5T5P2 1943 aa20.11■□□□□ 0.81
DDR1-277ENST00000515219 KLF18A0A0U1RQI7 1052 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
DDR1-277ENST00000515219 NKX3-2P78367 333 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 PPP2R5BQ15173 497 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 STXBP2Q15833 593 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 FSCN1Q16658 493 aaKnown RBP20.1■□□□□ 0.81
DDR1-277ENST00000515219 RTN1Q16799 776 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 Q6ZUG5 572 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 TMTC3Q6ZXV5 915 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
DDR1-277ENST00000515219 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
DDR1-277ENST00000515219 RBM27Q9P2N5 1060 aaKnown RBP20.1■□□□□ 0.81
DDR1-277ENST00000515219 ZEB2O60315 1214 aa20.09■□□□□ 0.81
DDR1-277ENST00000515219 PSMA5P28066 241 aa20.09■□□□□ 0.81
DDR1-277ENST00000515219 SEPT14Q6ZU15 432 aa20.09■□□□□ 0.81
DDR1-277ENST00000515219 OR6J1Q8NGC5 347 aa20.09■□□□□ 0.81
DDR1-277ENST00000515219 USP26Q9BXU7 913 aa20.09■□□□□ 0.81
DDR1-277ENST00000515219 PRDM5Q9NQX1 630 aaPredicted RBP20.09■□□□□ 0.81
DDR1-277ENST00000515219 ELP1O95163 1332 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 CEP290O15078 2479 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 hCG_1642624A0A1W2PR95 340 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 NR3C2P08235 984 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 TXNP10599 105 aaKnown RBP20.08■□□□□ 0.81
DDR1-277ENST00000515219 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
DDR1-277ENST00000515219 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
DDR1-277ENST00000515219 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 MAGEA10P43363 369 aaPredicted RBP20.08■□□□□ 0.81
DDR1-277ENST00000515219 TLE2Q04725 743 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 TTLL4Q14679 1199 aa20.08■□□□□ 0.81
DDR1-277ENST00000515219 NKRFO15226 690 aaKnown RBP eCLIP20.07■□□□□ 0.8
DDR1-277ENST00000515219 PQBP1O60828 265 aaKnown RBP20.07■□□□□ 0.8
DDR1-277ENST00000515219 MDM2Q00987 491 aaPredicted RBP20.07■□□□□ 0.8
DDR1-277ENST00000515219 APOBRQ0VD83 1088 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 CXCL17Q6UXB2 119 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 COPS5Q92905 334 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 BRF1Q92994 677 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 CUL5Q93034 780 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 GDF15Q99988 308 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 PRO3102Q9H379 93 aa20.07■□□□□ 0.8
DDR1-277ENST00000515219 EIF3JO75822 258 aaKnown RBP20.06■□□□□ 0.8
DDR1-277ENST00000515219 ARIH2O95376 493 aa20.06■□□□□ 0.8
DDR1-277ENST00000515219 PGM5Q15124 567 aa20.06■□□□□ 0.8
DDR1-277ENST00000515219 SMARCC2Q8TAQ2 1214 aa20.06■□□□□ 0.8
DDR1-277ENST00000515219 LBHD1Q9BQE6 289 aaPredicted RBP20.06■□□□□ 0.8
DDR1-277ENST00000515219 PDLIM7Q9NR12 457 aa20.06■□□□□ 0.8
DDR1-277ENST00000515219 CNTNAP5Q8WYK1 1306 aa20.05■□□□□ 0.8
DDR1-277ENST00000515219 A0A0U1RQG5 324 aaPredicted RBP20.05■□□□□ 0.8
DDR1-277ENST00000515219 CABYRO75952 493 aa20.05■□□□□ 0.8
DDR1-277ENST00000515219 CLTBP09497 229 aa20.05■□□□□ 0.8
DDR1-277ENST00000515219 CPT1AP50416 773 aa20.05■□□□□ 0.8
DDR1-277ENST00000515219 HEATR3Q7Z4Q2 680 aa20.05■□□□□ 0.8
DDR1-277ENST00000515219 MROH7Q68CQ1 1323 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 LTBP2Q14767 1821 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 DCDC2CA8MYV0 355 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 ARVCFO00192 962 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 CDC27P30260 824 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 CCND2P30279 289 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 BMP8BP34820 402 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 METAP2P50579 478 aaKnown RBP eCLIP20.04■□□□□ 0.83e-6■■■■□ 25.7
DDR1-277ENST00000515219 RCAN1P53805 252 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 LY6KQ17RY6 165 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 BRDTQ58F21 947 aaPredicted RBP20.04■□□□□ 0.8
DDR1-277ENST00000515219 CCDC62Q6P9F0 684 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 USP17L6PQ6QN14 398 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 RUFY3Q7L099 469 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 SH3RF1Q7Z6J0 888 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 IL31RAQ8NI17 732 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 TOX2Q96NM4 488 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 UBE2OQ9C0C9 1292 aaKnown RBP20.04■□□□□ 0.8
DDR1-277ENST00000515219 MRVI1Q9Y6F6 885 aa20.04■□□□□ 0.8
DDR1-277ENST00000515219 MYH7BA7E2Y1 1941 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms