RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ARVCFO00192 962 aa28.41■■■□□ 2.14
SNF8-213ENST00000514929 RAG1P15918 1043 aa28.41■■■□□ 2.14
SNF8-213ENST00000514929 FAAP100Q0VG06 881 aa28.41■■■□□ 2.14
SNF8-213ENST00000514929 ARHGEF16Q5VV41 709 aa28.41■■■□□ 2.14
SNF8-213ENST00000514929 PNMA6FA0A0J9YX94 578 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 SOX1O00570 391 aaPredicted RBP28.4■■■□□ 2.14
SNF8-213ENST00000514929 OPLAHO14841 1288 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 KIAA0355O15063 1070 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 CDK7P50613 346 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 COL9A3Q14050 684 aaPredicted RBP28.4■■■□□ 2.14
SNF8-213ENST00000514929 OR6J1Q8NGC5 347 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 PIBF1Q8WXW3 757 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 IWS1Q96ST2 819 aa28.4■■■□□ 2.14
SNF8-213ENST00000514929 NKRFO15226 690 aaKnown RBP eCLIP28.39■■■□□ 2.14
SNF8-213ENST00000514929 LIFRP42702 1097 aa28.39■■■□□ 2.14
SNF8-213ENST00000514929 HSD17B4P51659 736 aa28.39■■■□□ 2.14
SNF8-213ENST00000514929 STXBP2Q15833 593 aa28.39■■■□□ 2.14
SNF8-213ENST00000514929 LRRC2Q9BYS8 371 aa28.39■■■□□ 2.14
SNF8-213ENST00000514929 MAP3K20Q9NYL2 800 aaKnown RBP28.39■■■□□ 2.14
SNF8-213ENST00000514929 TXNP10599 105 aaKnown RBP28.38■■■□□ 2.13
SNF8-213ENST00000514929 EIF2AK2P19525 551 aaKnown RBP28.38■■■□□ 2.13
SNF8-213ENST00000514929 CPT1AP50416 773 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 GHRHRQ02643 423 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 TTLL4Q14679 1199 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 LRCH3Q96II8 777 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 NEK1Q96PY6 1258 aa28.38■■■□□ 2.13
SNF8-213ENST00000514929 TLR3O15455 904 aaKnown RBP28.37■■■□□ 2.13
SNF8-213ENST00000514929 CALM1P0DP23 149 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 CALM2P0DP24 149 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 CALM3P0DP25 149 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 GNAQP50148 359 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 BRDTQ58F21 947 aaPredicted RBP28.37■■■□□ 2.13
SNF8-213ENST00000514929 SEPT14Q6ZU15 432 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 SAMD3Q8N6K7 520 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 LZTS2Q9BRK4 669 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 SPZ1Q9BXG8 430 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 PXMP2Q9NR77 195 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 POLR3EQ9NVU0 708 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 SLC12A7Q9Y666 1083 aa28.37■■■□□ 2.13
SNF8-213ENST00000514929 BAZ2BQ9UIF8 2168 aaKnown RBP28.37■■■□□ 2.13
SNF8-213ENST00000514929 RXRAP19793 462 aa28.36■■■□□ 2.13
SNF8-213ENST00000514929 ITGB8P26012 769 aa28.36■■■□□ 2.13
SNF8-213ENST00000514929 HOXA13P31271 388 aaPredicted RBP28.36■■■□□ 2.13
SNF8-213ENST00000514929 ITGA7Q13683 1181 aa28.36■■■□□ 2.13
SNF8-213ENST00000514929 COPS5Q92905 334 aa28.36■■■□□ 2.13
SNF8-213ENST00000514929 RRP36Q96EU6 259 aaKnown RBP28.36■■■□□ 2.13
SNF8-213ENST00000514929 GCOM1H8Y6P7 765 aaPredicted RBP28.35■■■□□ 2.13
SNF8-213ENST00000514929 NR3C2P08235 984 aa28.35■■■□□ 2.13
SNF8-213ENST00000514929 POLR2MP0CAP2 368 aa28.35■■■□□ 2.13
SNF8-213ENST00000514929 FAM126BQ8IXS8 530 aa28.35■■■□□ 2.13
SNF8-213ENST00000514929 SEC63Q9UGP8 760 aaKnown RBP28.35■■■□□ 2.13
SNF8-213ENST00000514929 LAMA3Q16787 3333 aa28.35■■■□□ 2.13
SNF8-213ENST00000514929 ARIH2O95376 493 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 MYL3P08590 195 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 SMARCA1P28370 1054 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 PSMC6P62333 389 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 KRT32Q14532 448 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 RASEFQ8IZ41 740 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 SLC43A3Q8NBI5 491 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 SEZ6LQ9BYH1 1024 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 TBX21Q9UL17 535 aa28.34■■■□□ 2.13
SNF8-213ENST00000514929 EIF3JO75822 258 aaKnown RBP28.33■■■□□ 2.13
SNF8-213ENST00000514929 PLEKHA8P1O95397 391 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 TSGA10IPQ3SY00 556 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 CCDC62Q6P9F0 684 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 SYNE3Q6ZMZ3 975 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 SGMS1Q86VZ5 419 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 RAB11FIP4Q86YS3 637 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 PDCD2LQ9BRP1 358 aa28.33■■■□□ 2.13
SNF8-213ENST00000514929 TIMP1P01033 207 aa28.32■■■□□ 2.12
SNF8-213ENST00000514929 MYCLP12524 364 aaPredicted RBP28.32■■■□□ 2.12
SNF8-213ENST00000514929 PURAQ00577 322 aaKnown RBP28.32■■■□□ 2.12
SNF8-213ENST00000514929 SHHQ15465 462 aa28.32■■■□□ 2.12
SNF8-213ENST00000514929 DHX32Q7L7V1 743 aaKnown RBP28.32■■■□□ 2.12
SNF8-213ENST00000514929 FCHSD1Q86WN1 690 aa28.32■■■□□ 2.12
SNF8-213ENST00000514929 SRBD1Q8N5C6 995 aaKnown RBP28.32■■■□□ 2.12
SNF8-213ENST00000514929 MTG1Q9BT17 334 aaPredicted RBP28.32■■■□□ 2.12
SNF8-213ENST00000514929 GRIN2DO15399 1336 aa28.32■■■□□ 2.12
SNF8-213ENST00000514929 SZT2Q5T011 3432 aa28.32■■■□□ 2.12
SNF8-213ENST00000514929 A6NJR5 290 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 FPGSQ05932 587 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 LY6KQ17RY6 165 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 ADCK5Q3MIX3 580 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 MICU3Q86XE3 530 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 CMTR1Q8N1G2 835 aaKnown RBP28.31■■■□□ 2.12
SNF8-213ENST00000514929 TCEANC2Q96MN5 208 aa28.31■■■□□ 2.12
SNF8-213ENST00000514929 KIAA1217Q5T5P2 1943 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 KPNA6O60684 536 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 GH1P01241 217 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 CD4P01730 458 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 EXOSC10Q01780 885 aaKnown RBP28.3■■■□□ 2.12
SNF8-213ENST00000514929 C9orf50Q5SZB4 431 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 FANCBQ8NB91 859 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 MRVI1Q9Y6F6 885 aa28.3■■■□□ 2.12
SNF8-213ENST00000514929 PGM5Q15124 567 aa28.29■■■□□ 2.12
SNF8-213ENST00000514929 PPP1R12CQ9BZL4 782 aa28.29■■■□□ 2.12
SNF8-213ENST00000514929 HMGB1P09429 215 aaKnown RBP28.28■■■□□ 2.12
SNF8-213ENST00000514929 MFSD5Q6N075 450 aa28.28■■■□□ 2.12
SNF8-213ENST00000514929 GPR153Q6NV75 609 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms