RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	PTCH2	Q9Y6C5	1203 aa		11.34	□□□□□ -0.59
RACK1-233	ENST00000514455	ZSWIM8	A7E2V4	1837 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	PLXNB2	O15031	1838 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	LOC102724159	A0A0B4J2E5	919 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	ASB14	A6NK59	587 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	SPDYE3	A6NKU9	549 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	FOSB	P53539	338 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	PWP2	Q15269	919 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	CCL14	Q16627	93 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	UBE2S	Q16763	222 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	ARHGEF16	Q5VV41	709 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	JAKMIP3	Q5VZ66	844 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	LARP1B	Q659C4	914 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	OLFML2B	Q68BL8	750 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MCTP2	Q6DN12	878 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MAMDC4	Q6UXC1	1216 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	BLID	Q8IZY5	108 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MSL3	Q8N5Y2	521 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	FBXO18	Q8NFZ0	1043 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MAML3	Q96JK9	1138 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MPHOSPH6	Q99547	160 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	TINF2	Q9BSI4	451 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	PCDHA6	Q9UN73	950 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	PCDHA8	Q9Y5H6	950 aa		11.33	□□□□□ -0.6
RACK1-233	ENST00000514455	MMP1	P03956	469 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	NR3C2	P08235	984 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	ELN	P15502	786 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	EIF2AK2	P19525	551 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	PDC	P20941	246 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	GRK4	P32298	578 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	ANP32A	P39687	249 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	CLK2	P49760	499 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	ALDH5A1	P51649	535 aa	Predicted RBP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	AP3B2	Q13367	1082 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	SAFB	Q15424	915 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	NPY5R	Q15761	445 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	MFSD14C	Q5VZR4	134 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	REXO1	Q8N1G1	1221 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	DAGLB	Q8NCG7	672 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	SPRYD3	Q8NCJ5	442 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	SLAIN1	Q8ND83	568 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	FGD4	Q96M96	766 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	IWS1	Q96ST2	819 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	EHMT1	Q9H9B1	1298 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	BRMS1	Q9HCU9	246 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	PXMP2	Q9NR77	195 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	TSHZ2	Q9NRE2	1034 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	TMEM260	Q9NX78	707 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	FLRT1	Q9NZU1	646 aa		11.32	□□□□□ -0.6
RACK1-233	ENST00000514455	BTBD18	B2RXH4	712 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455		H3BQV1	296 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455		M0R2N6	131 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	ADAMTS3	O15072	1205 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	SNAI1	O95863	264 aa	Predicted RBP	11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	IGHA2	P01877	340 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	KRT2	P35908	639 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	GUCY1B3	Q02153	619 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	ARMCX2	Q7L311	632 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	VSIG10L	Q86VR7	867 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	MORC4	Q8TE76	937 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	TRIB2	Q92519	343 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	PDCD2L	Q9BRP1	358 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	ANO3	Q9BYT9	981 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	ASTN1	O14525	1302 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	SYNGAP1	Q96PV0	1343 aa		11.31	□□□□□ -0.6
RACK1-233	ENST00000514455	HMGCR	P04035	888 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	MYCL	P12524	364 aa	Predicted RBP	11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	EDNRB	P24530	442 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	CYP2C19	P33261	490 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	UBXN2A	P68543	259 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	PDE4D	Q08499	809 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	PGM5	Q15124	567 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	STXBP2	Q15833	593 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	SLC9C1	Q4G0N8	1177 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	KRT25	Q7Z3Z0	450 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	DIS3L2	Q8IYB7	885 aa	Known RBP	11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	RASGRP4	Q8TDF6	673 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	OXER1	Q8TDS5	423 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	PGBD1	Q96JS3	809 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	ABHD16B	Q9H3Z7	469 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	DAXX	Q9UER7	740 aa	Predicted RBP	11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	CNPY2	Q9Y2B0	182 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	RBM19	Q9Y4C8	960 aa	Known RBP	11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	RPTOR	Q8N122	1335 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	ZNF236	Q9UL36	1845 aa		11.3	□□□□□ -0.6
RACK1-233	ENST00000514455	PLXNA1	Q9UIW2	1896 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	CCDC194	A0A1B0GVG4	234 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	EIF3J	O75822	258 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	PDIA4	P13667	645 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	CCND2	P30279	289 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	CACNB2	Q08289	660 aa	Predicted RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	NR5A1	Q13285	461 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	ACVR2B	Q13705	512 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	GNL2	Q13823	731 aa	Known RBP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	NONO	Q15233	471 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	PRAMEF19	Q5SWL8	479 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	XRRA1	Q6P2D8	792 aa		11.29	□□□□□ -0.6
RACK1-233	ENST00000514455	EEPD1	Q7L9B9	569 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms