RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 EXOSC10Q01780 885 aaKnown RBP13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 CXCL17Q6UXB2 119 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 ANKRD33Q7Z3H0 272 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 SH3RF1Q7Z6J0 888 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 RRP36Q96EU6 259 aaKnown RBP13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 COL20A1Q9P218 1284 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
ARHGEF28-213ENST00000513841 GCOM1H8Y6P7 765 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 ARVCFO00192 962 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 OPLAHO14841 1288 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 EIF3JO75822 258 aaKnown RBP13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 CABYRO75952 493 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 SLC34A2O95436 690 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 NR3C2P08235 984 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 CLTBP09497 229 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 HSD17B4P51659 736 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
ARHGEF28-213ENST00000513841 MCM3APO60318 1980 aa13.4□□□□□ -0.27
ARHGEF28-213ENST00000513841 A0A0U1RQG5 324 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 REC8O95072 547 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 RXRAP19793 462 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 HOXA13P31271 388 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 FGD1P98174 961 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 BRDTQ58F21 947 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 RAB11FIP4Q86YS3 637 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 OR6J1Q8NGC5 347 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 BADQ92934 168 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 TCEANC2Q96MN5 208 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 PXMP2Q9NR77 195 aa13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 BAZ2BQ9UIF8 2168 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-213ENST00000513841 KIAA0355O15063 1070 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 MYL3P08590 195 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 RAG1P15918 1043 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 HSPA4P34932 840 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 CPT1AP50416 773 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 GHRHRQ02643 423 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 ITGA7Q13683 1181 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 SGMS1Q86VZ5 419 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 COPS5Q92905 334 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 KCNB2Q92953 911 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 SEZ6LQ9BYH1 1024 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 ALPK3Q96L96 1907 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
ARHGEF28-213ENST00000513841 A6NJR5 290 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 ZBTB43O43298 467 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 KPNA6O60684 536 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 ITGB8P26012 769 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 LY6KQ17RY6 165 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 CCDC62Q6P9F0 684 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
ARHGEF28-213ENST00000513841 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 ARIH2O95376 493 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 TIMP1P01033 207 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 GH1P01241 217 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 CPA1P15085 419 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 PSMC6P62333 389 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 CUL5Q93034 780 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 JAKMIP1Q96N16 626 aaKnown RBP13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 MRVI1Q9Y6F6 885 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
ARHGEF28-213ENST00000513841 hCG_1642624A0A1W2PR95 340 aa13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 PSMA5P28066 241 aa13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 CCND2P30279 289 aa13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 PGM5Q15124 567 aa13.35□□□□□ -0.27
ARHGEF28-213ENST00000513841 LRIT3Q3SXY7 679 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms