RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
CLOCK-211ENST00000513440 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
CLOCK-211ENST00000513440 NHEJ1Q9H9Q4 299 aaPredicted RBP15.68■□□□□ 0.1
CLOCK-211ENST00000513440 BLOC1S4Q9NUP1 217 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 CAPN11Q9UMQ6 739 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 RASSF10A6NK89 507 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 EPHB6O15197 1021 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
CLOCK-211ENST00000513440 BBOX1O75936 387 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
CLOCK-211ENST00000513440 FKBP15Q5T1M5 1219 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 CNNM4Q6P4Q7 775 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 SERPINB13Q9UIV8 391 aa15.68■□□□□ 0.1
CLOCK-211ENST00000513440 SRGNP10124 158 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 VSNL1P62760 191 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 KIAA0825Q8IV33 1275 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 CAGE1Q8TC20 777 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 JMJD4Q9H9V9 463 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 ABCB6Q9NP58 842 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 RGL2O15211 777 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 ZNF185O15231 689 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 ECM1Q16610 540 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 ANKRD13CQ8N6S4 541 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 C7orf25Q9BPX7 421 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 PHACTR2O75167 634 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 DNA2P51530 1060 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 IKQ13123 557 aaPredicted RBP15.67■□□□□ 0.1
CLOCK-211ENST00000513440 DDX12PQ92771 950 aa15.67■□□□□ 0.1
CLOCK-211ENST00000513440 DDX25Q9UHL0 483 aaKnown RBP15.67■□□□□ 0.1
CLOCK-211ENST00000513440 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
CLOCK-211ENST00000513440 DEF6Q9H4E7 631 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 RIOX1Q9H6W3 641 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 JADE2Q9NQC1 790 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 TTLL1O95922 423 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 MIIPQ5JXC2 388 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 DNAJC7Q99615 494 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 FUT8Q9BYC5 575 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 AFF2P51816 1311 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
CLOCK-211ENST00000513440 EDIL3O43854 480 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 STAT3P40763 770 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■□□□ 12.3
CLOCK-211ENST00000513440 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 CRACR2AQ9BSW2 395 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 CUEDC2Q9H467 287 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 PDE11AQ9HCR9 933 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 GAKO14976 1311 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 A0A1W2PQC6 194 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 FECHP22830 423 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 CYLC1P35663 651 aaPredicted RBP15.65■□□□□ 0.1
CLOCK-211ENST00000513440 RRAGAQ7L523 313 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 MTMR9Q96QG7 549 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 MMS19Q96T76 1030 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 FAM170AA1A519 330 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 E9PMD0 336 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 H3BQF6 201 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 POLRMTO00411 1230 aaKnown RBP15.65■□□□□ 0.1
CLOCK-211ENST00000513440 KIF20AO95235 890 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 MYL1P05976 194 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 MATR3P43243 847 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLOCK-211ENST00000513440 APBA1Q02410 837 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 ZNF543Q08ER8 600 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 ASPRV1Q53RT3 343 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 CDC42EP5Q6NZY7 148 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 GSPT2Q8IYD1 628 aaKnown RBP15.65■□□□□ 0.1
CLOCK-211ENST00000513440 FGFBP2Q9BYJ0 223 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 PSTPIP2Q9H939 334 aa15.65■□□□□ 0.1
CLOCK-211ENST00000513440 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.1
CLOCK-211ENST00000513440 N4BP1O75113 896 aaKnown RBP15.64■□□□□ 0.09
CLOCK-211ENST00000513440 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
CLOCK-211ENST00000513440 ARID5AQ03989 594 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 USH1GQ495M9 461 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 C15orf52Q6ZUT6 534 aaKnown RBP15.64■□□□□ 0.09
CLOCK-211ENST00000513440 CERKQ8TCT0 537 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 MLXIPQ9HAP2 919 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 NAP1L1P55209 391 aaKnown RBP15.64■□□□□ 0.09
CLOCK-211ENST00000513440 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
CLOCK-211ENST00000513440 RAD54LQ92698 747 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 HAUS4Q9H6D7 363 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 GDF11O95390 407 aa15.64■□□□□ 0.09
CLOCK-211ENST00000513440 SHMT1P34896 483 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms