RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ERVFRD-1P60508 538 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 PLCB3Q01970 1234 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 CCDC82Q8N4S0 544 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 TP53I13Q8NBR0 393 aaPredicted RBP5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 PRAM1Q96QH2 718 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 BDH2Q9BUT1 245 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 OSBPL7Q9BZF2 842 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 PALD1Q9ULE6 856 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 PIK3C2GO75747 1445 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 PEAK1Q9H792 1746 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 LOC105371045A0A1W2PR82 267 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 EFEMP2O95967 443 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 PGRP06401 933 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 POLD1P28340 1107 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 CDR1P51861 262 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 PRELPP51888 382 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 PDE4BQ07343 736 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 RTP5Q14D33 572 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 RGL3Q3MIN7 710 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 DNAJC5GQ8N7S2 189 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 CYB5D2Q8WUJ1 264 aa5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 DPH2Q9BQC3 489 aaPredicted RBP5.4□□□□□ -1.54
PDLIM5-218ENST00000513341 SHANK3Q9BYB0 1731 aa5.4□□□□□ -1.55
PDLIM5-218ENST00000513341 CRB1P82279 1406 aa5.4□□□□□ -1.55
PDLIM5-218ENST00000513341 ATP7BP35670 1465 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 CARNS1A5YM72 827 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 TREHO43280 583 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 TNFRSF1AP19438 455 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 IGDCC3Q8IVU1 814 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 ENOX1Q8TC92 643 aaKnown RBP5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 C1orf115Q9H7X2 142 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 SPATA31E1Q6ZUB1 1445 aa5.39□□□□□ -1.55
PDLIM5-218ENST00000513341 COL24A1Q17RW2 1714 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 K7ESM1 405 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 EXOC5O00471 708 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 GCP02774 474 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 HMGB2P26583 209 aaKnown RBP5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 ITGAEP38570 1179 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 ZXDAP98168 799 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 TMEM62Q0P6H9 643 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 VMACQ2NL98 169 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 TTBK2Q6IQ55 1244 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 RNF111Q6ZNA4 994 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 ACSF2Q96CM8 615 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 PRR36Q9H6K5 1346 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 BRD4O60885 1362 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 ATP10DQ9P241 1426 aa5.38□□□□□ -1.55
PDLIM5-218ENST00000513341 C1QTNF3-AMACRE9PGA6 284 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 PRICKLE3O43900 615 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 TOMM70O94826 608 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 MAGEA10P43363 369 aaPredicted RBP5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 GALK1P51570 392 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 SAFB2Q14151 953 aaKnown RBP eCLIP5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 ZNF827Q17R98 1081 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 PTF1AQ7RTS3 328 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 LDHDQ86WU2 507 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 MAP6Q96JE9 813 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 PWWP2AQ96N64 755 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 ASPNQ9BXN1 380 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 FAM8A1Q9UBU6 413 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 TULP4Q9NRJ4 1543 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 PHRF1Q9P1Y6 1649 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 LMO7Q8WWI1 1683 aa5.37□□□□□ -1.55
PDLIM5-218ENST00000513341 KCNC1P48547 511 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 TOM1L2Q6ZVM7 507 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 SIRT2Q8IXJ6 389 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 SRRDQ9UH36 339 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 DCTN4Q9UJW0 460 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 PCDHA5Q9Y5H7 936 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 CD2APQ9Y5K6 639 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 USP19O94966 1318 aa5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 POLR3AO14802 1390 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 COL5A2P05997 1499 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-218ENST00000513341 ITSN1Q15811 1721 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 QSER1Q2KHR3 1735 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 ADCY9O60503 1353 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 ACEP12821 1306 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 WDR17Q8IZU2 1322 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 SLURP1P55000 103 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 SLC14A2Q15849 920 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 ALG1LQ6GMV1 187 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 NLGN1Q8N2Q7 840 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 SYTL5Q8TDW5 730 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 VWCEQ96DN2 955 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 HIRIP3Q9BW71 556 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 C12orf49Q9H741 205 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 KLHL14Q9P2G3 628 aa5.35□□□□□ -1.55
PDLIM5-218ENST00000513341 AKAP12Q02952 1782 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 IRS2Q9Y4H2 1338 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 OVOL3O00110 214 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 FFAR3O14843 346 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 MPOP05164 745 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 YARSP54577 528 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 ADAM17P78536 824 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 PDE4CQ08493 712 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 CBX2Q14781 532 aaPredicted RBP5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 TMEM201Q5SNT2 666 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 AGMOQ6ZNB7 445 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 SLFN12Q8IYM2 578 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms