RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 PLA2G12BQ9BX93 195 aa6.1□□□□□ -1.43
HTT-211ENST00000513326 RBSNQ9H1K0 784 aa6.1□□□□□ -1.43
HTT-211ENST00000513326 TTYH1Q9H313 450 aaPredicted RBP6.1□□□□□ -1.43
HTT-211ENST00000513326 C11orf49Q9H6J7 331 aa6.1□□□□□ -1.43
HTT-211ENST00000513326 PLXNB2O15031 1838 aa6.1□□□□□ -1.43
HTT-211ENST00000513326 PTPRFP10586 1907 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 ADARB2-AS1A8MUL3 147 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 WDHD1O75717 1129 aaPredicted RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 GHRHP01286 108 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 GSTT1P30711 240 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 PLA2G5P39877 138 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 TBC1D8BQ0IIM8 1120 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 TCP10Q12799 353 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 NFIAQ12857 509 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 NFX1Q12986 1120 aaKnown RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 CHAF1AQ13111 956 aaPredicted RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 GCKRQ14397 625 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 TMEM87AQ8NBN3 555 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 IRF7Q92985 503 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 FAM84BQ96KN1 310 aaPredicted RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 ZKSCAN3Q9BRR0 538 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 PUS3Q9BZE2 481 aaKnown RBP6.09□□□□□ -1.43
HTT-211ENST00000513326 LIN7BQ9HAP6 207 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 KLF15Q9UIH9 416 aa6.09□□□□□ -1.43
HTT-211ENST00000513326 LTBP2Q14767 1821 aa6.09□□□□□ -1.44
HTT-211ENST00000513326 MAST2Q6P0Q8 1798 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 RPAP1Q9BWH6 1393 aaPredicted RBP6.08□□□□□ -1.44
HTT-211ENST00000513326 AK9Q5TCS8 1911 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 ANKRD18BA2A2Z9 1011 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 J3QW42 95 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 CTSHP09668 335 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 COL6A1P12109 1028 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 ADH7P40394 386 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 TNNI2P48788 182 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 SRSF11Q05519 484 aaKnown RBP6.08□□□□□ -1.44
HTT-211ENST00000513326 RNFT1Q5M7Z0 435 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 C9orf50Q5SZB4 431 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 TREML2Q5T2D2 321 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 GADL1Q6ZQY3 521 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 FAM35AQ86V20 835 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 CCNJLQ8IV13 435 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 ANKRD13CQ8N6S4 541 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 GOLGA6L1Q8N7Z2 621 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 GLIS3Q8NEA6 775 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 TRIB2Q92519 343 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 ZNF341Q9BYN7 854 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 SEMA6BQ9H3T3 888 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 METTL5Q9NRN9 209 aaKnown RBP6.08□□□□□ -1.44
HTT-211ENST00000513326 ZNF112Q9UJU3 913 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 GDF2Q9UK05 429 aaPredicted RBP6.08□□□□□ -1.44
HTT-211ENST00000513326 OGDHLQ9ULD0 1010 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 PHIPQ8WWQ0 1821 aa6.08□□□□□ -1.44
HTT-211ENST00000513326 TMEM265A0A087WTH1 108 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 ELOA3CA0A087WX78 387 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 A0A0G2JLL6 359 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 ELOA3DA6NLF2 546 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 DDX58O95786 925 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 HMGCRP04035 888 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 USP17L7P0C7H9 530 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 XRCC5P13010 732 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 EIF2AK2P19525 551 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 ALAS2P22557 587 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 HIBADHP31937 336 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 SHHQ15465 462 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 ELOA3BQ3SY89 546 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 FAM83AQ86UY5 434 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 TMEM102Q8N9M5 508 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 ELOA3Q8NG57 546 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 ZDHHC15Q96MV8 337 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 TCF12Q99081 682 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 MDFIQ99750 246 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 OXCT2Q9BYC2 517 aaPredicted RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
HTT-211ENST00000513326 ZFYVE1Q9HBF4 777 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 GJD2Q9UKL4 321 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 ZHX2Q9Y6X8 837 aa6.07□□□□□ -1.44
HTT-211ENST00000513326 FRMPD3Q5JV73 1810 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 TMEM238LA0A1B0GVL6 79 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 TRIM75PA6NK02 468 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 PDE2AO00408 941 aaPredicted RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 CXCL11O14625 94 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 SMNDC1O75940 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
HTT-211ENST00000513326 CPB1P15086 417 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 ACPPP15309 386 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 CCND3P30281 292 aaPredicted RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 IFIT5Q13325 482 aaKnown RBP6.06□□□□□ -1.44
HTT-211ENST00000513326 CCL14Q16627 93 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 MAP3K21Q5TCX8 1036 aa6.06□□□□□ -1.44
HTT-211ENST00000513326 DCAF15Q66K64 600 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms