RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANAPC15P60006 121 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 LSAMPQ13449 338 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 KIZQ2M2Z5 673 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 SLC35F1Q5T1Q4 408 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 KIAA0907Q7Z7F0 614 aaPredicted RBP5.86□□□□□ -1.47
HTT-210ENST00000512909 DDX53Q86TM3 631 aaKnown RBP5.86□□□□□ -1.47
HTT-210ENST00000512909 PDZD8Q8NEN9 1154 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 NPLOC4Q8TAT6 608 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.86□□□□□ -1.47
HTT-210ENST00000512909 TRMT2BQ96GJ1 504 aaKnown RBP5.86□□□□□ -1.47
HTT-210ENST00000512909 TMEM169Q96HH4 297 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 ERVK13-1Q9NX77 482 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 GPR160Q9UJ42 338 aa5.86□□□□□ -1.47
HTT-210ENST00000512909 POLA1P09884 1462 aaPredicted RBP5.85□□□□□ -1.47
HTT-210ENST00000512909 FGD5Q6ZNL6 1462 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 hCG_2014768A0A024R1R8 64 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 RBAK-RBAKDNI3L0D1 243 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 USP2O75604 605 aaPredicted RBP5.85□□□□□ -1.47
HTT-210ENST00000512909 ASLP04424 464 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 FUT4P22083 530 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 PAK1Q13153 545 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 LRP8Q14114 963 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 TKFCQ3LXA3 575 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 RALGPS1Q5JS13 557 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 WWC2Q6AWC2 1192 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 STYK1Q6J9G0 422 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 KCNT2Q6UVM3 1135 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 BRAPQ7Z569 592 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 SPRED2Q7Z698 418 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 NBPF11Q86T75 865 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 CHAC2Q8WUX2 184 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 RC3H2Q9HBD1 1191 aaKnown RBP5.85□□□□□ -1.47
HTT-210ENST00000512909 PRDM7Q9NQW5 492 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 CLDND1Q9NY35 253 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 MARCH2Q9P0N8 246 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 DBR1Q9UK59 544 aaKnown RBP5.85□□□□□ -1.47
HTT-210ENST00000512909 TRAF6Q9Y4K3 522 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 NUB1Q9Y5A7 615 aa5.85□□□□□ -1.47
HTT-210ENST00000512909 TMEM82A0PJX8 343 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 KIAA1324LA8MWY0 1029 aaPredicted RBP5.84□□□□□ -1.47
HTT-210ENST00000512909 FAM47E-STBD1D6RA91 191 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 PPM1GO15355 546 aaPredicted RBP5.84□□□□□ -1.47
HTT-210ENST00000512909 ZGLP1P0C6A0 271 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 SRGAP2CP0DJJ0 459 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 SPINK2P20155 84 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 IGFALSP35858 605 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 AFMP43652 599 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 CBX2Q14781 532 aaPredicted RBP5.84□□□□□ -1.47
HTT-210ENST00000512909 BICRALQ6AI39 1079 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 CEP68Q76N32 757 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 PPM1KQ8N3J5 372 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 MYLIPQ8WY64 445 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 SLC52A2Q9HAB3 445 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 CATSPERZQ9NTU4 200 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 PCDHA9Q9Y5H5 950 aa5.84□□□□□ -1.47
HTT-210ENST00000512909 WRNQ14191 1432 aaPredicted RBP eCLIP5.83□□□□□ -1.48
HTT-210ENST00000512909 BIN1O00499 593 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 MAFKO60675 156 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 CRTAMO95727 393 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 FUCA1P04066 466 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 BCL6P41182 706 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 IGBP1P78318 339 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 CYP4F8P98187 520 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 LILRA2Q8N149 483 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 KREMEN2Q8NCW0 462 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 HHIPL1Q96JK4 782 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 CABP5Q9NP86 173 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 PAK6Q9NQU5 681 aaPredicted RBP5.83□□□□□ -1.48
HTT-210ENST00000512909 INTS7Q9NVH2 962 aaKnown RBP5.83□□□□□ -1.48
HTT-210ENST00000512909 GULP1Q9UBP9 304 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 PCDHA8Q9Y5H6 950 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 CUX1P39880 1505 aa5.83□□□□□ -1.48
HTT-210ENST00000512909 C7orf72A4D263 438 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 FADS2P1A8MWK0 482 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 H7BY64 318 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 KRIT1O00522 736 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 DGKIO75912 1065 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 MED26O95402 600 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 GNAT1P11488 350 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 PRKCAP17252 672 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 GRK2P25098 689 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 GRK3P35626 688 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 GDNFP39905 211 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 DNM2P50570 870 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 SPIRE1Q08AE8 756 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 CHRNA2Q15822 529 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 NTRK3Q16288 839 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 PTPROQ16827 1216 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 DALRD3Q5D0E6 543 aaKnown RBP5.82□□□□□ -1.48
HTT-210ENST00000512909 TRIM61Q5EBN2 209 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 LBX2Q6XYB7 198 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 ANKRD13AQ8IZ07 590 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 RCBTB1Q8NDN9 531 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 ABHD4Q8TB40 342 aa5.82□□□□□ -1.48
HTT-210ENST00000512909 SLC7A14Q8TBB6 771 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms