RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 ABCB11O95342 1321 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 MCM3APO60318 1980 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 KIF28PB7ZC32 967 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 TNFRSF10AO00220 468 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 TXNP10599 105 aaKnown RBP14.71□□□□□ -0.05
VEGFA-216ENST00000512683 TMEM63BQ5T3F8 832 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-216ENST00000512683 SESTD1Q86VW0 696 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 USP38Q8NB14 1042 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 ASB2Q96Q27 587 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 SLC9A7Q96T83 725 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 NKX2-4Q9H2Z4 354 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 TRMT13Q9NUP7 481 aaKnown RBP14.71□□□□□ -0.05
VEGFA-216ENST00000512683 THEGQ9P2T0 379 aa14.71□□□□□ -0.05
VEGFA-216ENST00000512683 BAIAP3O94812 1187 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 IQCF3P0C7M6 154 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 HAND2P61296 217 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 TRAF1Q13077 416 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 ADGRE1Q14246 886 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 STXBP2Q15833 593 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 ASPRV1Q53RT3 343 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 TMEM67Q5HYA8 995 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 CCDC62Q6P9F0 684 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 SLC30A10Q6XR72 485 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 RASGRP2Q7LDG7 609 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 CCDC155Q8N6L0 562 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 CAGE1Q8TC20 777 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 VWCEQ96DN2 955 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 KAT14Q9H8E8 782 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 MRPL11Q9Y3B7 192 aaKnown RBP14.7□□□□□ -0.06
VEGFA-216ENST00000512683 DDX49Q9Y6V7 483 aaKnown RBP14.7□□□□□ -0.06
VEGFA-216ENST00000512683 VCANP13611 3396 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 CDH23Q9H251 3354 aa14.7□□□□□ -0.06
VEGFA-216ENST00000512683 ZBBXA8MT70 800 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 EIF3JO75822 258 aaKnown RBP14.69□□□□□ -0.06
VEGFA-216ENST00000512683 GH1P01241 217 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 CYP2C9P11712 490 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 CASTP20810 708 aaKnown RBP14.69□□□□□ -0.06
VEGFA-216ENST00000512683 IGFBP4P22692 258 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 AAK1Q2M2I8 961 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 PPP2R2DQ66LE6 453 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 PNMA1Q8ND90 353 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 SCLYQ96I15 445 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 DSCC1Q9BVC3 393 aa14.69□□□□□ -0.06
VEGFA-216ENST00000512683 YBX2Q9Y2T7 364 aaKnown RBP14.69□□□□□ -0.06
VEGFA-216ENST00000512683 PTGS1P23219 599 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
VEGFA-216ENST00000512683 FAM47CQ5HY64 1035 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 KCNV1Q6PIU1 500 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 TBC1D10CQ8IV04 446 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 IL27Q8NEV9 243 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 SYTL5Q8TDW5 730 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-216ENST00000512683 AFAP1L1Q8TED9 768 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 EMID1Q96A84 441 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-216ENST00000512683 ZSCAN10Q96SZ4 725 aaPredicted RBP14.68□□□□□ -0.06
VEGFA-216ENST00000512683 KRT23Q9C075 422 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 CNNM2Q9H8M5 875 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 NOD1Q9Y239 953 aa14.68□□□□□ -0.06
VEGFA-216ENST00000512683 GTPBP6O43824 516 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-216ENST00000512683 KDM4AO75164 1064 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
VEGFA-216ENST00000512683 GHRHRQ02643 423 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 RBL2Q08999 1139 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 LAMC2Q13753 1193 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
VEGFA-216ENST00000512683 DGKDQ16760 1214 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 FBXO11Q86XK2 927 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 PPM1EQ8WY54 764 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 RMDN3Q96TC7 470 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 KATNAL1Q9BW62 490 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 UBA5Q9GZZ9 404 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 DIAPH3Q9NSV4 1193 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 ZSWIM5Q9P217 1185 aa14.67□□□□□ -0.06
VEGFA-216ENST00000512683 SPTBN5Q9NRC6 3674 aaKnown RBP14.66□□□□□ -0.06
VEGFA-216ENST00000512683 EFCAB14O75071 495 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 PPFIA4O75335 1185 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 TGFB3P10600 412 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 PDE4AP27815 886 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 RABGGTBP53611 331 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 PTGISQ16647 500 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 DEFB128Q7Z7B8 93 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 TAAR1Q96RJ0 339 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 FTOQ9C0B1 505 aaKnown RBP eCLIP14.66□□□□□ -0.06
VEGFA-216ENST00000512683 COG5Q9UP83 839 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 LCTP09848 1927 aa14.66□□□□□ -0.06
VEGFA-216ENST00000512683 MMP3P08254 477 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 GOLGA8HP0CJ92 632 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-216ENST00000512683 ARHGAP1Q07960 439 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 USH1GQ495M9 461 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 ARHGEF16Q5VV41 709 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 CWC27Q6UX04 472 aaKnown RBP14.65□□□□□ -0.06
VEGFA-216ENST00000512683 HERC6Q8IVU3 1022 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
VEGFA-216ENST00000512683 AFG1LQ8WV93 481 aa14.65□□□□□ -0.06
VEGFA-216ENST00000512683 COPS5Q92905 334 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms