RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NSUN3Q9H649 340 aaKnown RBP10.97□□□□□ -0.65
NUP54-211ENST00000512151 ACAD9Q9H845 621 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 CTNNA3Q9UI47 895 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 CTDP1Q9Y5B0 961 aaPredicted RBP10.97□□□□□ -0.65
NUP54-211ENST00000512151 ZNF532Q9HCE3 1301 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 USP17L12C9JPN9 530 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 USP17L21D6R901 530 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 H3BNC9 293 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 LINC01565O15544 149 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 TBX10O75333 385 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 SELPP16109 830 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 HTRA4P83105 476 aaPredicted RBP10.96□□□□□ -0.65
NUP54-211ENST00000512151 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
NUP54-211ENST00000512151 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.65
NUP54-211ENST00000512151 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 SLC9C2Q5TAH2 1124 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 LRRC8DQ7L1W4 858 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 OR6J1Q8NGC5 347 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 AFAP1L1Q8TED9 768 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
NUP54-211ENST00000512151 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 VTA1Q9NP79 307 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 TNNQ9UQP3 1299 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 COG6Q9Y2V7 657 aa10.96□□□□□ -0.65
NUP54-211ENST00000512151 PDGFBP01127 241 aaPredicted RBP10.95□□□□□ -0.66
NUP54-211ENST00000512151 GNAI2P04899 355 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 OAZ1P54368 228 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 PTPN11Q06124 597 aaPredicted RBP10.95□□□□□ -0.66
NUP54-211ENST00000512151 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
NUP54-211ENST00000512151 MBTPS1Q14703 1052 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 PTGISQ16647 500 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 GDF6Q6KF10 455 aaPredicted RBP10.95□□□□□ -0.66
NUP54-211ENST00000512151 TMED8Q6PL24 325 aaPredicted RBP10.95□□□□□ -0.66
NUP54-211ENST00000512151 COPS5Q92905 334 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 NYAP2Q9P242 653 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 INSL6Q9Y581 213 aa10.95□□□□□ -0.66
NUP54-211ENST00000512151 DMDP11532 3685 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
NUP54-211ENST00000512151 LOC730098B7Z3J9 87 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 LGR5O75473 907 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 BCAR3O75815 825 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 MBD4O95243 580 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 CHGBP05060 677 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 CKBP12277 381 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 CPT1AP50416 773 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 CHMP4BP1P59074 171 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 SNAP25P60880 206 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 RBL2Q08999 1139 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 TMEM192Q8IY95 271 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 CAGE1Q8TC20 777 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 WNT8BQ93098 351 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 TRERF1Q96PN7 1200 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
NUP54-211ENST00000512151 FEM1BQ9UK73 627 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 NLRC5Q86WI3 1866 aa10.94□□□□□ -0.66
NUP54-211ENST00000512151 A6NJR5 290 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 E9PSI1 815 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
NUP54-211ENST00000512151 RASA1P20936 1047 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 NBL1P41271 181 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 SIGLEC14Q08ET2 396 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 IKBKEQ14164 716 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
NUP54-211ENST00000512151 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
NUP54-211ENST00000512151 CTR9Q6PD62 1173 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 SSH3Q8TE77 659 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 IRF2BPLQ9H1B7 796 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 ATP8A2Q9NTI2 1148 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 CD207Q9UJ71 328 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 MYH4Q9Y623 1939 aa10.93□□□□□ -0.66
NUP54-211ENST00000512151 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
NUP54-211ENST00000512151 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
NUP54-211ENST00000512151 ALAS1P13196 640 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 CBX2Q14781 532 aaPredicted RBP10.92□□□□□ -0.66
NUP54-211ENST00000512151 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 FBXO11Q86XK2 927 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 MYOCDQ8IZQ8 938 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 CCDC155Q8N6L0 562 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 CHMP4CQ96CF2 233 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 MSLNLQ96KJ4 702 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 SAMD11Q96NU1 681 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 ZBED9Q6R2W3 1325 aa10.92□□□□□ -0.66
NUP54-211ENST00000512151 GRM6O15303 877 aa10.91□□□□□ -0.66
NUP54-211ENST00000512151 EFCAB14O75071 495 aa10.91□□□□□ -0.66
NUP54-211ENST00000512151 ZNF618Q5T7W0 954 aa10.91□□□□□ -0.66
NUP54-211ENST00000512151 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
NUP54-211ENST00000512151 KAT2BQ92831 832 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms