RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NCAM1P13591 858 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 LIMS1P48059 325 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 RPL11P62913 178 aaKnown RBP4.89□□□□□ -1.63
CHD1-207ENST00000511628 SLC9A5Q14940 896 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 WWC2Q6AWC2 1192 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 DCP2Q8IU60 420 aaKnown RBP4.89□□□□□ -1.63
CHD1-207ENST00000511628 IGDCC3Q8IVU1 814 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 NETO2Q8NC67 525 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 DIO2Q92813 273 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 DDX11Q96FC9 970 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 TRMT2BQ96GJ1 504 aaKnown RBP4.89□□□□□ -1.63
CHD1-207ENST00000511628 MMP19Q99542 508 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 YIPF4Q9BSR8 244 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHD1-207ENST00000511628 COA3Q9Y2R0 106 aaPredicted RBP4.89□□□□□ -1.63
CHD1-207ENST00000511628 PCDHA5Q9Y5H7 936 aa4.89□□□□□ -1.63
CHD1-207ENST00000511628 C22orf46C9J442 243 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 ZBTB7AO95365 584 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 NTRK1P04629 796 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 GLI4P10075 376 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 VMACQ2NL98 169 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 DPH6Q7L8W6 267 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 FAM129CQ86XR2 697 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 TEX2Q8IWB9 1127 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 COPS5Q92905 334 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 MRGPRX3Q96LB0 322 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 LNPKQ9C0E8 428 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 EPN3Q9H201 632 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 TIMM13Q9Y5L4 95 aaPredicted RBP4.88□□□□□ -1.63
CHD1-207ENST00000511628 HCFC2Q9Y5Z7 792 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 PMF1-BGLAPU3KQ54 211 aa4.88□□□□□ -1.63
CHD1-207ENST00000511628 IQCA1LA6NCM1 817 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 IRS4O14654 1257 aaPredicted RBP4.87□□□□□ -1.63
CHD1-207ENST00000511628 GTF2A2P52657 109 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 FOXO4P98177 505 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 RBL2Q08999 1139 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 KCNAB2Q13303 367 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 E4F1Q66K89 784 aaPredicted RBP4.87□□□□□ -1.63
CHD1-207ENST00000511628 CEP68Q76N32 757 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 PPIL6Q8IXY8 311 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 ZNF513Q8N8E2 541 aaPredicted RBP4.87□□□□□ -1.63
CHD1-207ENST00000511628 PMFBP1Q8TBY8 1022 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 MICAL1Q8TDZ2 1067 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 FRS2Q8WU20 508 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 DACT3Q96B18 629 aaPredicted RBP4.87□□□□□ -1.63
CHD1-207ENST00000511628 ARMC5Q96C12 935 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 TMEM169Q96HH4 297 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 RNF38Q9H0F5 515 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 BCAS3Q9H6U6 928 aa4.87□□□□□ -1.63
CHD1-207ENST00000511628 TBX1O43435 398 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 ASGR2P07307 311 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 SP8Q8IXZ3 490 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 TMEFF1Q8IYR6 380 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 KCTD13Q8WZ19 329 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 TSPAN17Q96FV3 270 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 MTA3Q9BTC8 594 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 PARD6AQ9NPB6 346 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 SIT1Q9Y3P8 196 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 PCDHA2Q9Y5H9 948 aa4.86□□□□□ -1.63
CHD1-207ENST00000511628 PPP1R11O60927 126 aaPredicted RBP4.85□□□□□ -1.63
CHD1-207ENST00000511628 PMLP29590 882 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 LTBRP36941 435 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 BCL6P41182 706 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 MC3RP41968 323 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 CTSWP56202 376 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 HSP90AA2PQ14568 343 aaPredicted RBP4.85□□□□□ -1.63
CHD1-207ENST00000511628 DDR2Q16832 855 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 INF2Q27J81 1249 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 PRSS53Q2L4Q9 553 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 SLC10A6Q3KNW5 377 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 MROH9Q5TGP6 573 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 ERICH6BQ5W0A0 696 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 MBLAC2Q68D91 279 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 MRM1Q6IN84 353 aaKnown RBP4.85□□□□□ -1.63
CHD1-207ENST00000511628 LILRA6Q6PI73 481 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 NPLOC4Q8TAT6 608 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 SEC14L1Q92503 715 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 PIF1Q9H611 641 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 IRS2Q9Y4H2 1338 aa4.85□□□□□ -1.63
CHD1-207ENST00000511628 CCDC85CA6NKD9 419 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 SMARCA5O60264 1052 aaPredicted RBP4.84□□□□□ -1.63
CHD1-207ENST00000511628 FPR2P25090 351 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 PPP2R2AP63151 447 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 SF1Q15637 639 aaKnown RBP4.84□□□□□ -1.63
CHD1-207ENST00000511628 CHRNA2Q15822 529 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 CCDC144BQ3MJ40 725 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 TTLL10Q6ZVT0 673 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 USP53Q70EK8 1073 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 MILR1Q7Z6M3 343 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 ZC3H18Q86VM9 953 aaKnown RBP4.84□□□□□ -1.63
CHD1-207ENST00000511628 ZDHHC14Q8IZN3 488 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 CELF2-AS1Q8N7Q2 184 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 LINC01356Q8N9X3 169 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 MARCH10Q8NA82 808 aaPredicted RBP4.84□□□□□ -1.63
CHD1-207ENST00000511628 TMEM145Q8NBT3 493 aa4.84□□□□□ -1.63
CHD1-207ENST00000511628 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms