RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 ADAM15Q13444 863 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
PTCD2-208ENST00000510676 CPXCR1Q8N123 301 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 TMEM105Q8N8V8 129 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 LMAN2LQ9H0V9 348 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 GPR108Q9NPR9 543 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 A1CFQ9NQ94 594 aaKnown RBP12.99□□□□□ -0.33
PTCD2-208ENST00000510676 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 MICAL3Q7RTP6 2002 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 ATG2AQ2TAZ0 1938 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 CEP295Q9C0D2 2601 aa12.99□□□□□ -0.33
PTCD2-208ENST00000510676 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 KPNA6O60684 536 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 ZBED4O75132 1171 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 MYL3P08590 195 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 COASYQ13057 564 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTCD2-208ENST00000510676 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
PTCD2-208ENST00000510676 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
PTCD2-208ENST00000510676 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
PTCD2-208ENST00000510676 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 A6NJR5 290 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 LINC01565O15544 149 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 PTGISQ16647 500 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 KIAA1211Q6ZU35 1233 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 NUP88Q99567 741 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 ACAD9Q9H845 621 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 DCP1AQ9NPI6 582 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
PTCD2-208ENST00000510676 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
PTCD2-208ENST00000510676 AMHP03971 560 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 RB1P06400 928 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 CYP2D6P10635 497 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 CKBP12277 381 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTCD2-208ENST00000510676 RRP1P56182 461 aaKnown RBP12.96□□□□□ -0.33
PTCD2-208ENST00000510676 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 PPP1R13LQ8WUF5 828 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
PTCD2-208ENST00000510676 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 SLC4A3P48751 1232 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
PTCD2-208ENST00000510676 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-208ENST00000510676 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTCD2-208ENST00000510676 WDR11Q9BZH6 1224 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
PTCD2-208ENST00000510676 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 USP15Q9Y4E8 981 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-208ENST00000510676 RALGAPA2Q2PPJ7 1873 aa12.95□□□□□ -0.34
PTCD2-208ENST00000510676 SPEGQ15772 3267 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 F5H6K3 240 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 GRM6O15303 877 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 LGR5O75473 907 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 NDUFB10O96000 172 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
PTCD2-208ENST00000510676 CDK8P49336 464 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 NDUFV1P49821 464 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 KLRC3Q07444 240 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
PTCD2-208ENST00000510676 MYOCDQ8IZQ8 938 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 MEIS3Q99687 375 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
PTCD2-208ENST00000510676 SEMA4AQ9H3S1 761 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 HOMER2Q9NSB8 354 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 MYH8P13535 1937 aa12.94□□□□□ -0.34
PTCD2-208ENST00000510676 MAST4O15021 2626 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 FRYQ5TBA9 3013 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 LOC102724159A0A0B4J2E5 919 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 FDX1P10109 184 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 PWP2Q15269 919 aaKnown RBP12.93□□□□□ -0.34
PTCD2-208ENST00000510676 TRIM71Q2Q1W2 868 aaKnown RBP12.93□□□□□ -0.34
PTCD2-208ENST00000510676 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
PTCD2-208ENST00000510676 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 EFHBQ8N7U6 833 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 SUSD6Q92537 303 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
PTCD2-208ENST00000510676 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms