RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 TEX11Q8IYF3 940 aa10.93□□□□□ -0.66
RETREG1-206ENST00000510362 OPTNQ96CV9 577 aa10.93□□□□□ -0.66
RETREG1-206ENST00000510362 GPATCH3Q96I76 525 aa10.93□□□□□ -0.66
RETREG1-206ENST00000510362 OXCT2Q9BYC2 517 aaPredicted RBP10.93□□□□□ -0.66
RETREG1-206ENST00000510362 BCL11AQ9H165 835 aa10.93□□□□□ -0.66
RETREG1-206ENST00000510362 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
RETREG1-206ENST00000510362 PSAPP07602 524 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 CYP7A1P22680 504 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 SOX18P35713 384 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 MAPK8P45983 427 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.92□□□□□ -0.66
RETREG1-206ENST00000510362 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
RETREG1-206ENST00000510362 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
RETREG1-206ENST00000510362 ANTXR1Q9H6X2 564 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 DDX4Q9NQI0 724 aaKnown RBP10.92□□□□□ -0.66
RETREG1-206ENST00000510362 PAG1Q9NWQ8 432 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 RNF186Q9NXI6 227 aa10.92□□□□□ -0.66
RETREG1-206ENST00000510362 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
RETREG1-206ENST00000510362 GOLIM4O00461 696 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 EIF1AYO14602 144 aaKnown RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 EREGO14944 169 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 TRPA1O75762 1119 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 COL19A1Q14993 1142 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 COL13A1Q5TAT6 717 aaPredicted RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 OTUD7BQ6GQQ9 843 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 MIGA2Q7L4E1 593 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ADGRA1Q86SQ6 560 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ERO1BQ86YB8 467 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 MAGEB6Q8N7X4 407 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ACDQ96AP0 544 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 GCC1Q96CN9 775 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 HAUS7Q99871 368 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 UBE2OQ9C0C9 1292 aaKnown RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 OSBPL5Q9H0X9 879 aaPredicted RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
RETREG1-206ENST00000510362 IGFLR1Q9H665 355 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ECHDC1Q9NTX5 307 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 KANSL3Q9P2N6 904 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ZNF112Q9UJU3 913 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 NAV1Q8NEY1 1877 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 ATAD5Q96QE3 1844 aa10.91□□□□□ -0.66
RETREG1-206ENST00000510362 MYH1P12882 1939 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 CPNE3O75131 537 aaKnown RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 SLURP2P0DP57 97 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 CES1P23141 567 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 GTF2A2P52657 109 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 NRLP54845 237 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 PLAURQ03405 335 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 TBC1D8BQ0IIM8 1120 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 SLC9C2Q5TAH2 1124 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 MDFIQ99750 246 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 DNAJC25Q9H1X3 360 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 BOLA2Q9H3K6 86 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 DNAJB12Q9NXW2 375 aaKnown RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 GDF2Q9UK05 429 aaPredicted RBP10.9□□□□□ -0.66
RETREG1-206ENST00000510362 SNCAIPQ9Y6H5 919 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 SIPA1L1O43166 1804 aa10.9□□□□□ -0.66
RETREG1-206ENST00000510362 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
RETREG1-206ENST00000510362 FLT1P17948 1338 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 TTC41PQ6P2S7 1318 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 PNMA6FA0A0J9YX94 578 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 ZBTB42B2RXF5 422 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 PDE6AP16499 860 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 GPLD1P80108 840 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 MAP3K10Q02779 954 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 PPATQ06203 517 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 PPIL2Q13356 520 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 ENOX2Q16206 610 aaKnown RBP10.89□□□□□ -0.67
RETREG1-206ENST00000510362 ZSCAN25Q6NSZ9 544 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 SLCO4C1Q6ZQN7 724 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
RETREG1-206ENST00000510362 HERC5Q9UII4 1024 aaKnown RBP10.89□□□□□ -0.67
RETREG1-206ENST00000510362 SUPT16HQ9Y5B9 1047 aaKnown RBP10.89□□□□□ -0.67
RETREG1-206ENST00000510362 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 ERC2O15083 957 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 CTNND1O60716 968 aaKnown RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 DYNLL1P63167 89 aaKnown RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 MLLT1Q03111 559 aaPredicted RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 SNAPC2Q13487 334 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 SCYL3Q8IZE3 742 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 PMEPA1Q969W9 287 aa10.88□□□□□ -0.67
RETREG1-206ENST00000510362 NSUN5Q96P11 429 aaKnown RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 RWDD1Q9H446 243 aaPredicted RBP10.88□□□□□ -0.67
RETREG1-206ENST00000510362 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms