RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 SEPT14Q6ZU15 432 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 CHST3Q7LGC8 479 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
SCARB2-204ENST00000509994 MORC4Q8TE76 937 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-204ENST00000509994 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 TTYH1Q9H313 450 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-204ENST00000509994 IL23AQ9NPF7 189 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 MSRAQ9UJ68 235 aa11.82□□□□□ -0.52
SCARB2-204ENST00000509994 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
SCARB2-204ENST00000509994 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 CFBP00751 764 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 CD4P01730 458 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 FGBP02675 491 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 SUPT20HL2P0C7V6 817 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 NKX3-2P78367 333 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 OTOP2Q7RTS6 562 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 PPP1R13LQ8WUF5 828 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 COPS5Q92905 334 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 SCLYQ96I15 445 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 RMDN3Q96TC7 470 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 TRMT13Q9NUP7 481 aaKnown RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 UMODL1Q5DID0 1318 aa11.81□□□□□ -0.52
SCARB2-204ENST00000509994 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
SCARB2-204ENST00000509994 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 KPNA6O60684 536 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 CYP2C9P11712 490 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 PDE4AP27815 886 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 PURAQ00577 322 aaKnown RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 RPUSD2Q8IZ73 545 aaKnown RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 SLC43A3Q8NBI5 491 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
SCARB2-204ENST00000509994 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 GRIN2DO15399 1336 aa11.8□□□□□ -0.52
SCARB2-204ENST00000509994 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-204ENST00000509994 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 TANC1Q9C0D5 1861 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
SCARB2-204ENST00000509994 GH1P01241 217 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-204ENST00000509994 PBX2P40425 430 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 WTAPQ15007 396 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 RAB30Q15771 203 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 STXBP2Q15833 593 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 CYB5R4Q7L1T6 521 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 C16orf59Q7L2K0 433 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 STAG2Q8N3U4 1231 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 SYTL5Q8TDW5 730 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-204ENST00000509994 PIBF1Q8WXW3 757 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 TBC1D5Q92609 795 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 FTOQ9C0B1 505 aaKnown RBP eCLIP11.79□□□□□ -0.52
SCARB2-204ENST00000509994 IL25Q9H293 177 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 SLC4A7Q9Y6M7 1214 aa11.79□□□□□ -0.52
SCARB2-204ENST00000509994 SORBS3O60504 671 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 ARIH2O95376 493 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 EDNRBP24530 442 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 CHMLP26374 656 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 PTH1RQ03431 593 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 NCOA7Q8NI08 942 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 AFG1LQ8WV93 481 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 HERVK_113Q902F9 699 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 ANKS1AQ92625 1134 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 PBX4Q9BYU1 374 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 SLC28A3Q9HAS3 691 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 CXXC1Q9P0U4 656 aaPredicted RBP11.78□□□□□ -0.52
SCARB2-204ENST00000509994 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
SCARB2-204ENST00000509994 ZBTB5O15062 677 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 CYP21A2P08686 494 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 ACTN1P12814 892 aa11.77□□□□□ -0.53
SCARB2-204ENST00000509994 IGFBP4P22692 258 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms