RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FANCBQ8NB91 859 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 TBC1D5Q92609 795 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 PIGSQ96S52 555 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 AMNQ9BXJ7 453 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 ALDH8A1Q9H2A2 487 aaPredicted RBP10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 PDGFCQ9NRA1 345 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 PDRG1Q9NUG6 133 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 CYP46A1Q9Y6A2 500 aa10.13□□□□□ -0.79
PDLIM5-213ENST00000509357 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 MYADML2A6NDP7 307 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 GOLGA8BA8MQT2 603 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 DCDC2CA8MYV0 355 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 CFBP00751 764 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 ASGR1P07306 291 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 PSMA5P28066 241 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 GJA9P57773 515 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 BEX3Q00994 111 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 TLE2Q04725 743 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 SCRN1Q12765 414 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 TRAF1Q13077 416 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 TLK2Q86UE8 772 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 DNERQ8NFT8 737 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 CTCFLQ8NI51 663 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 PIBF1Q8WXW3 757 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 GDF15Q99988 308 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 WDR11Q9BZH6 1224 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 KATNBL1Q9H079 304 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 PCDH10Q9P2E7 1040 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 PCDHA1Q9Y5I3 950 aa10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 RANBP2P49792 3224 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-213ENST00000509357 TRIOBPQ9H2D6 2365 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 LOC102724159A0A0B4J2E5 919 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 ZBTB5O15062 677 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 ZBTB43O43298 467 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 ADCY6O43306 1168 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 SMPD1P17405 629 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 KIF5BP33176 963 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 BMP8BP34820 402 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 NEK4P51957 841 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 STK3Q13188 491 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 PWP2Q15269 919 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 PKN1Q16512 942 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 FSCN1Q16658 493 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 BRDTQ58F21 947 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 ARHGEF16Q5VV41 709 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 TAPT1Q6NXT6 567 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 SYNE3Q6ZMZ3 975 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 TMTC2Q8N394 836 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 NECAB1Q8N987 351 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 NSUN6Q8TEA1 469 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 SPZ1Q9BXG8 430 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 UPF3AQ9H1J1 476 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 TMEM39AQ9NV64 488 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 COL20A1Q9P218 1284 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 SLC12A7Q9Y666 1083 aa10.11□□□□□ -0.79
PDLIM5-213ENST00000509357 ELP1O95163 1332 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 A0A0U1RQG5 324 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 CLTBP09497 229 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 CST5P28325 142 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 FGD1P98174 961 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 SNX17Q15036 470 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 PPP2R5BQ15173 497 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 RTN1Q16799 776 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 C1orf53Q5VUE5 145 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 CXCL17Q6UXB2 119 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 OR6J1Q8NGC5 347 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 SYTL5Q8TDW5 730 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 SCFD2Q8WU76 684 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 PHKBQ93100 1093 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 AIFM3Q96NN9 605 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 TAAR1Q96RJ0 339 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 RMDN3Q96TC7 470 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 PDLIM7Q9NR12 457 aa10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 GNEQ9Y223 722 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-213ENST00000509357 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 PNMA6FA0A0J9YX94 578 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 ARVCFO00192 962 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 TLR3O15455 904 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 PFKFB2O60825 505 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CABYRO75952 493 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 MYL3P08590 195 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CALM1P0DP23 149 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CALM2P0DP24 149 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 CALM3P0DP25 149 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 TXNP10599 105 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 RAG1P15918 1043 aa10.09□□□□□ -0.79
PDLIM5-213ENST00000509357 EIF2AK2P19525 551 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms