RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SCG2P13521 617 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 NAPAP54920 295 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 SCRN1Q12765 414 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 ARHGEF16Q5VV41 709 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 NOL8Q76FK4 1167 aaKnown RBP23.23■■□□□ 1.31
HOXC6-204ENST00000509328 TRIM22Q8IYM9 498 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 ANKLE1Q8NAG6 615 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 TBC1D32Q96NH3 1257 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 SLC26A6Q9BXS9 759 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 PXMP2Q9NR77 195 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 BARHL2Q9NY43 387 aa23.23■■□□□ 1.31
HOXC6-204ENST00000509328 STXBP3O00186 592 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 SSRP1Q08945 709 aaKnown RBP23.22■■□□□ 1.31
HOXC6-204ENST00000509328 RABEP1Q15276 862 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 CCDC144BQ3MJ40 725 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 EEPD1Q7L9B9 569 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 FCHSD1Q86WN1 690 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 FBXO16Q8IX29 292 aaPredicted RBP23.22■■□□□ 1.31
HOXC6-204ENST00000509328 SMARCC2Q8TAQ2 1214 aa23.22■■□□□ 1.31
HOXC6-204ENST00000509328 MEIS2O14770 477 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 CDKL5O76039 1030 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 RARBP10826 455 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 EIF2AK2P19525 551 aaKnown RBP23.21■■□□□ 1.31
HOXC6-204ENST00000509328 PKN1Q16512 942 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 ME3Q16798 604 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 ANO1Q5XXA6 986 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 TEX2Q8IWB9 1127 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 IL27Q8NEV9 243 aa23.21■■□□□ 1.31
HOXC6-204ENST00000509328 TYW1BQ6NUM6 668 aa23.2■■□□□ 1.3
HOXC6-204ENST00000509328 TAPT1Q6NXT6 567 aa23.2■■□□□ 1.3
HOXC6-204ENST00000509328 USP17L6PQ6QN14 398 aa23.2■■□□□ 1.3
HOXC6-204ENST00000509328 LIMCH1Q9UPQ0 1083 aa23.2■■□□□ 1.3
HOXC6-204ENST00000509328 PPFIA3O75145 1194 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 FARP2O94887 1054 aaPredicted RBP23.19■■□□□ 1.3
HOXC6-204ENST00000509328 LARGE1O95461 756 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 NR3C2P08235 984 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 ADCY7P51828 1080 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 STXBP2Q15833 593 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 IQSEC1Q6DN90 963 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 CCDC12Q8WUD4 166 aaPredicted RBP23.19■■□□□ 1.3
HOXC6-204ENST00000509328 GTF3C6Q969F1 213 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 PDCD2LQ9BRP1 358 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 GLT8D2Q9H1C3 349 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 RIC8AQ9NPQ8 531 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 XPNPEP3Q9NQH7 507 aa23.19■■□□□ 1.3
HOXC6-204ENST00000509328 FRMPD4Q14CM0 1322 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 SMCO2A6NFE2 343 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 DUSP11O75319 330 aaKnown RBP23.18■■□□□ 1.3
HOXC6-204ENST00000509328 DEXIO95424 95 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 ADCYAP1R1P41586 468 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 TNFAIP2Q03169 654 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 PGM5Q15124 567 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 ARRDC4Q8NCT1 418 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 PDGFCQ9NRA1 345 aa23.18■■□□□ 1.3
HOXC6-204ENST00000509328 RBM47A0AV96 593 aaKnown RBP23.17■■□□□ 1.3
HOXC6-204ENST00000509328 ESYT2A0FGR8 921 aa23.17■■□□□ 1.3
HOXC6-204ENST00000509328 EIF3JO75822 258 aaKnown RBP23.17■■□□□ 1.3
HOXC6-204ENST00000509328 UBE2Q1Q7Z7E8 422 aa23.17■■□□□ 1.3
HOXC6-204ENST00000509328 NECAB1Q8N987 351 aa23.17■■□□□ 1.3
HOXC6-204ENST00000509328 LENG1Q96BZ8 264 aaPredicted RBP23.17■■□□□ 1.3
HOXC6-204ENST00000509328 STK36Q9NRP7 1315 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.16■■□□□ 1.3
HOXC6-204ENST00000509328 ADCY6O43306 1168 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 ST18O60284 1047 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 MYCLP12524 364 aaPredicted RBP23.16■■□□□ 1.3
HOXC6-204ENST00000509328 CCND2P30279 289 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 MNX1P50219 401 aaPredicted RBP23.16■■□□□ 1.3
HOXC6-204ENST00000509328 UBE2SQ16763 222 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 VSIG10LQ86VR7 867 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 CCDC148Q8NFR7 591 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
HOXC6-204ENST00000509328 SH3GLB2Q9NR46 395 aa23.16■■□□□ 1.3
HOXC6-204ENST00000509328 SPDYE3A6NKU9 549 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 DNM1LO00429 736 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 SMPD1P17405 629 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 MLLT1Q03111 559 aaPredicted RBP23.15■■□□□ 1.3
HOXC6-204ENST00000509328 NECAB2Q7Z6G3 386 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 IL31RAQ8NI17 732 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 DIS3LQ8TF46 1054 aaKnown RBP23.15■■□□□ 1.3
HOXC6-204ENST00000509328 SCFD2Q8WU76 684 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
HOXC6-204ENST00000509328 WDR11Q9BZH6 1224 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 ZMYND12Q9H0C1 365 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 C6orf50Q9HD87 102 aa23.15■■□□□ 1.3
HOXC6-204ENST00000509328 GNEQ9Y223 722 aaKnown RBP23.15■■□□□ 1.3
HOXC6-204ENST00000509328 SYNRGQ9UMZ2 1314 aa23.14■■□□□ 1.3
HOXC6-204ENST00000509328 KBTBD13C9JR72 458 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 ADAMTS4O75173 837 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 CTDNEP1O95476 244 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 PGK1P00558 417 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 FOSP01100 380 aaPredicted RBP23.14■■□□□ 1.29
HOXC6-204ENST00000509328 LRRC41Q15345 812 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 DUSP28Q4G0W2 176 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 GJC2Q5T442 439 aaPredicted RBP23.14■■□□□ 1.29
HOXC6-204ENST00000509328 RNF180Q86T96 592 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 UPF3AQ9H1J1 476 aaKnown RBP23.14■■□□□ 1.29
HOXC6-204ENST00000509328 EHMT1Q9H9B1 1298 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 SPC25Q9HBM1 224 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 SH2B1Q9NRF2 756 aaPredicted RBP23.14■■□□□ 1.29
HOXC6-204ENST00000509328 VPS54Q9P1Q0 977 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms