RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CTSHP09668 335 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 IFIT1P09914 478 aaKnown RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 EIF4BP23588 611 aaKnown RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 CHRNDQ07001 517 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 OS9Q13438 667 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 EXOSC6Q5RKV6 272 aaKnown RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 C15orf52Q6ZUT6 534 aaKnown RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 ATG9AQ7Z3C6 839 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 KIF1BPQ96EK5 621 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 RNF208Q9H0X6 261 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 TAOK3Q9H2K8 898 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 CCDC86Q9H6F5 360 aaKnown RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 PPP4R2Q9NY27 417 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 GPN3Q9UHW5 284 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 CHD4Q14839 1912 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.33
HMGB1P44-201ENST00000508597 SNED1Q8TER0 1413 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 K7ELQ4 463 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF862O60290 1169 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 TIAF1O95411 115 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 LIG1P18858 919 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 KCNJ4P48050 445 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 GPSM2P81274 684 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 PUM3Q15397 648 aaKnown RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 LRRC24Q50LG9 513 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 VGLL2Q8N8G2 317 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 KLHDC4Q8TBB5 520 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 TBC1D16Q8TBP0 767 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 LPIN2Q92539 896 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 NECAB3Q96P71 396 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 BACH2Q9BYV9 841 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 PUS3Q9BZE2 481 aaKnown RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 TMEM39AQ9NV64 488 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 FAM8A1Q9UBU6 413 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 PA2G4Q9UQ80 394 aaKnown RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 DICER1Q9UPY3 1922 aaKnown RBP6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF804BA4D1E1 1349 aa6.71□□□□□ -1.34
HMGB1P44-201ENST00000508597 SBF1O95248 1867 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 MED23Q9ULK4 1368 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 A0A1B0GUL6 1792 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SCAMP3O14828 347 aaKnown RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 IGSF3O75054 1194 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 UFL1O94874 794 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 CELA3AP09093 270 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SLC5A1P13866 664 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 FGFR2P21802 821 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 BMP6P22004 513 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 GSTT1P30711 240 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 IRX6P78412 446 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 CAVIN4Q5BKX8 364 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 MEI1Q5TIA1 1274 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SMC5Q8IY18 1101 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 CLASRPQ8N2M8 674 aaKnown RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 C12orf50Q8NA57 414 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SMG8Q8ND04 991 aaKnown RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 JDP2Q8WYK2 163 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 LRRCC1Q9C099 1032 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SIL1Q9H173 461 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 METTL5Q9NRN9 209 aaKnown RBP6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 POLLQ9UGP5 575 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPP1R9AQ9ULJ8 1098 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 CCDC88AQ3V6T2 1871 aa6.7□□□□□ -1.34
HMGB1P44-201ENST00000508597 SASH1O94885 1247 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 CYP11A1P05108 521 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 LMNB1P20700 586 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 IARSP41252 1262 aaKnown RBP6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 MMP14P50281 582 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 TFCP2Q12800 502 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 ATP2B3Q16720 1220 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 SGO2Q562F6 1265 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 PRSS36Q5K4E3 855 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF804AQ7Z570 1209 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 SHISA5Q8N114 240 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 C2CD4AQ8NCU7 369 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 ZNF512BQ96KM6 892 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 COA1Q9GZY4 146 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 SUGCTQ9HAC7 445 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 GNL3LQ9NVN8 582 aaKnown RBP6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 EXOC6BQ9Y2D4 811 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 FPGT-TNNI3KV9GXZ4 949 aa6.69□□□□□ -1.34
HMGB1P44-201ENST00000508597 COL4A1P02462 1669 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 UTRNP46939 3433 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 A0A1B0GUL7 405 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 PPIP5K2O43314 1243 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 TAF5LO75529 589 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
HMGB1P44-201ENST00000508597 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms