RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 WWC2Q6AWC2 1192 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 PLEKHO2Q8TD55 490 aa8.44□□□□□ -1.06
TOPBP1-206ENST00000508524 A0A1W2PQU0 124 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 BUB1BO60566 1050 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 GRIA2P42262 883 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 PPP2R2AP63151 447 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 TESK1Q15569 626 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 ACBD5Q5T8D3 534 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 DENND5AQ6IQ26 1287 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 FAM129CQ86XR2 697 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 DACT3Q96B18 629 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 CCDC140Q96MF4 163 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 C8orf37Q96NL8 207 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 MARCH2Q9P0N8 246 aa8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 DBR1Q9UK59 544 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-206ENST00000508524 CPP00450 1065 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 FUCA1P04066 466 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 TEX2Q8IWB9 1127 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 TMEM145Q8NBT3 493 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 TSPAN17Q96FV3 270 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 PEX11GQ96HA9 241 aa8.42□□□□□ -1.06
TOPBP1-206ENST00000508524 AGRPO00253 132 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 MEFVO15553 781 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 STK10O94804 968 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 NTRK1P04629 796 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 KCNJ6P48051 423 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 RBM10P98175 930 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 KCNAB2Q13303 367 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 SLC35F1Q5T1Q4 408 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 PPIL6Q8IXY8 311 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 USP33Q8TEY7 942 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 DIO2Q92813 273 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 BCAS3Q9H6U6 928 aa8.41□□□□□ -1.06
TOPBP1-206ENST00000508524 ASGR2P07307 311 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 ATF2P15336 505 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 PFKLP17858 780 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 LIMS1P48059 325 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 TARBP2Q15633 366 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 TCERG1LQ5VWI1 586 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 CNKSR3Q6P9H4 555 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 Q8N1Y9 231 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 ALG3Q92685 438 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 RNF38Q9H0F5 515 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 NUDT5Q9UKK9 219 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 SIT1Q9Y3P8 196 aa8.4□□□□□ -1.06
TOPBP1-206ENST00000508524 FPR2P25090 351 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 PMLP29590 882 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 AFF3P51826 1226 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 RCBTB1Q8NDN9 531 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 SGSM3Q96HU1 749 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 TRIM55Q9BYV6 548 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 MSRB2Q9Y3D2 182 aa8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 TIMM13Q9Y5L4 95 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-206ENST00000508524 C22orf46C9J442 243 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 LCP1P13796 627 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 LTBRP36941 435 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 BCL6P41182 706 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 MC3RP41968 323 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 MAP4K2Q12851 820 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 SLC9A5Q14940 896 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 LCE4AQ5TA78 99 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 IER2Q9BTL4 223 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 ARHGEF4Q9NR80 690 aa8.38□□□□□ -1.07
TOPBP1-206ENST00000508524 NCAM1P13591 858 aa8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 DCP2Q8IU60 420 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 PWWP2AQ96N64 755 aa8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 NPFFR2Q9Y5X5 522 aa8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 X6R8D5 127 aa8.37□□□□□ -1.07
TOPBP1-206ENST00000508524 DLX3O60479 287 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 TRIM13O60858 407 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 ZBTB7AO95365 584 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 GTF2A2P52657 109 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 CEP68Q76N32 757 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 RIOX2Q8IUF8 465 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 KCTD13Q8WZ19 329 aa8.36□□□□□ -1.07
TOPBP1-206ENST00000508524 ADAMTS20P59510 1910 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 IQCA1LA6NCM1 817 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 SGSM2O43147 1006 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 MYO1BO43795 1136 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 SLC6A11P48066 632 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 FOXO4P98177 505 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 HSP90AA2PQ14568 343 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 MROH9Q5TGP6 573 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 CPA5Q8WXQ8 436 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 AARSD1Q9BTE6 412 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 PCDHA2Q9Y5H9 948 aa8.35□□□□□ -1.07
TOPBP1-206ENST00000508524 VMACQ2NL98 169 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms