RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 TTLL1O95922 423 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 IFIT2P09913 472 aaKnown RBP10.89□□□□□ -0.67
CAST-220ENST00000508117 ATP5JP18859 108 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 STAT2P52630 851 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 ZSCAN25Q6NSZ9 544 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 FBXO16Q8IX29 292 aaPredicted RBP10.89□□□□□ -0.67
CAST-220ENST00000508117 FTSJ3Q8IY81 847 aaKnown RBP10.89□□□□□ -0.67
CAST-220ENST00000508117 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 CHURC1Q8WUH1 139 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 HAUS7Q99871 368 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 MTG1Q9BT17 334 aaPredicted RBP10.89□□□□□ -0.67
CAST-220ENST00000508117 CYP39A1Q9NYL5 469 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 PTGS1P23219 599 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 KCNJ6P48051 423 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 ERVK-21P61565 698 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 HS6ST3Q8IZP7 471 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 STAG1Q8WVM7 1258 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 CEP95Q96GE4 821 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 STRBPQ96SI9 672 aaKnown RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
CAST-220ENST00000508117 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
CAST-220ENST00000508117 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
CAST-220ENST00000508117 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 TMEM232C9JQI7 657 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 NKRFO15226 690 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAST-220ENST00000508117 RLBP1P12271 317 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 WDR5P61964 334 aaKnown RBP10.87□□□□□ -0.67
CAST-220ENST00000508117 NBPF20Q3BBV1 942 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 TMEM63BQ5T3F8 832 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 EEPD1Q7L9B9 569 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
CAST-220ENST00000508117 NEDD1Q8NHV4 660 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 CAGE1Q8TC20 777 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 AFAP1L1Q8TED9 768 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 FBXL18Q96ME1 805 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 TGS1Q96RS0 853 aaKnown RBP10.87□□□□□ -0.67
CAST-220ENST00000508117 RAD9AQ99638 391 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 BOLA2Q9H3K6 86 aa10.87□□□□□ -0.67
CAST-220ENST00000508117 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
CAST-220ENST00000508117 RAD50Q92878 1312 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 LCHNA4D1U4 455 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 A6NJR5 290 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 DCXO43602 365 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 EFCAB14O75071 495 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 PPP1R37O75864 691 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 GJB5O95377 273 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 CHGBP05060 677 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 ALAS1P13196 640 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 IL9P15248 144 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 SSTR3P32745 418 aaPredicted RBP10.86□□□□□ -0.67
CAST-220ENST00000508117 RBL2Q08999 1139 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
CAST-220ENST00000508117 SPRED2Q7Z698 418 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 LRRC47Q8N1G4 583 aaKnown RBP10.86□□□□□ -0.67
CAST-220ENST00000508117 CCDC155Q8N6L0 562 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CAST-220ENST00000508117 ABHD14A-ACY1A0A1B0GW23 586 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 RAB11FIP3O75154 756 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 CXCL10P02778 98 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 MYL3P08590 195 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 KCNA5P22460 613 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 SLC1A4P43007 532 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 ALDH5A1P51649 535 aaPredicted RBP10.85□□□□□ -0.67
CAST-220ENST00000508117 GPNMBQ14956 572 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 MUM1L1Q5H9M0 696 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 FAM47CQ5HY64 1035 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 SESTD1Q86VW0 696 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 UIMC1Q96RL1 719 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 CTNNA3Q9UI47 895 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 DDX49Q9Y6V7 483 aaKnown RBP10.85□□□□□ -0.67
CAST-220ENST00000508117 WDFY4Q6ZS81 3184 aa10.85□□□□□ -0.67
CAST-220ENST00000508117 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 HMMRO75330 724 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 ICAM1P05362 532 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 SELPP16109 830 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 GNAT2P19087 354 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 RCSD1Q6JBY9 416 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
CAST-220ENST00000508117 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms