RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 USP7Q93009 1102 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 TTC1Q99614 292 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
USP53-204ENST00000507906 IPPKQ9H8X2 491 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 ZSWIM5Q9P217 1185 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 TRHDEQ9UKU6 1024 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 CBLCQ9ULV8 474 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 PCDHA2Q9Y5H9 948 aa5.46□□□□□ -1.54
USP53-204ENST00000507906 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 B4E1Z4 1266 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 H3BS24 57 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 FGF10O15520 208 aaPredicted RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 PRPF3O43395 683 aaKnown RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 FKBP9O95302 570 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 SCGB1D2O95969 90 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 FLT3P36888 993 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 SCNN1BP51168 640 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 NEK2P51955 445 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 EPHB1P54762 984 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 PAK1Q13153 545 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 TMEM177Q53S58 311 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 HSP90AB2PQ58FF8 381 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 FSTL4Q6MZW2 842 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 FKBP9P1Q75LS8 142 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 ANKLE2Q86XL3 938 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 KIF18BQ86Y91 864 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 OR2W6PQ8NHA6 318 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 GIMAP7Q8NHV1 300 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 CHTF18Q8WVB6 975 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 UBE2FQ969M7 185 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 PTCHD1Q96NR3 888 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 GPR101Q96P66 508 aaPredicted RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 ZFYVE21Q9BQ24 234 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP53-204ENST00000507906 SEMA3GQ9NS98 782 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 SPTLC3Q9NUV7 552 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
USP53-204ENST00000507906 STOML1Q9UBI4 398 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 TCFL5Q9UL49 500 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 RAXQ9Y2V3 346 aa5.45□□□□□ -1.54
USP53-204ENST00000507906 GNAT3A8MTJ3 354 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 WNT9AO14904 365 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 ZEB2O60315 1214 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 PYGMP11217 842 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 CPEP16870 476 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 TPP2P29144 1249 aaPredicted RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 DNM2P50570 870 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 TBX4P57082 545 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 RSPO4Q2I0M5 234 aaPredicted RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 CYP27C1Q4G0S4 372 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 SYDE2Q5VT97 1194 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 EEF1DP3Q658K8 133 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 C14orf80Q86SX3 495 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 DDX53Q86TM3 631 aaKnown RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 WDR75Q8IWA0 830 aaKnown RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 HOOK2Q96ED9 719 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 C8orf48Q96LL4 319 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 MMP19Q99542 508 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 PUS7LQ9H0K6 701 aaKnown RBP5.44□□□□□ -1.54
USP53-204ENST00000507906 GPATCH2Q9NW75 528 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 ZIM2Q9NZV7 527 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 B4GALT6Q9UBX8 382 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 TCEAL9Q9UHQ7 104 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 PCDHA11Q9Y5I1 949 aa5.44□□□□□ -1.54
USP53-204ENST00000507906 NPHP3-ACAD11A0A0J9YXS1 232 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 CCDC194A0A1B0GVG4 234 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 CCDC66A2RUB6 948 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 C7orf72A4D263 438 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 TGM5O43548 720 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 ESR1P03372 595 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 SOD2P04179 222 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 PAMP19021 973 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 PPP2R5AQ15172 486 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 INAVAQ3KP66 663 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 RNF43Q68DV7 783 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 NLRP10Q86W26 655 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 PLD6Q8N2A8 252 aaKnown RBP5.43□□□□□ -1.54
USP53-204ENST00000507906 CISD2Q8N5K1 135 aaKnown RBP5.43□□□□□ -1.54
USP53-204ENST00000507906 TP53INP1Q96A56 240 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 CDADC1Q9BWV3 514 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 JAM3Q9BX67 310 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 CELF4Q9BZC1 486 aaKnown RBP5.43□□□□□ -1.54
USP53-204ENST00000507906 EMC7Q9NPA0 242 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 EBF1Q9UH73 591 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 ZNF281Q9Y2X9 895 aa5.43□□□□□ -1.54
USP53-204ENST00000507906 TCRBV5S4A2TA0A5A2 114 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 PTPDC1A2A3K4 754 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 FZD9O00144 591 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 DVL2O14641 736 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 BCL6P41182 706 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 PCBP3P57721 371 aaKnown RBP5.42□□□□□ -1.54
USP53-204ENST00000507906 IL2P60568 153 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 ERVK-21P61565 698 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 TEKQ02763 1124 aa5.42□□□□□ -1.54
USP53-204ENST00000507906 KCNAB2Q13303 367 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms