RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 IFIT1P09914 478 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 FAAP100Q0VG06 881 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 GRAPQ13588 217 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 COL9A2Q14055 689 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 GRAPLQ8TC17 118 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 CLUHP3Q96NS8 147 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 APBA2Q99767 749 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 FBXO9Q9UK97 447 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 PCDHB10Q9UN67 800 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 PDS5AQ29RF7 1337 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 COL11A2P13942 1736 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 ATP4AP20648 1035 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 GUCY2FP51841 1108 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 MTMR1Q13613 665 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 AGMOQ6ZNB7 445 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 C15orf52Q6ZUT6 534 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 CHAC2Q8WUX2 184 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 PUS3Q9BZE2 481 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 TRIM8Q9BZR9 551 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 DZANK1Q9NVP4 752 aa8.29□□□□□ -1.08
CLCN3-206ENST00000507875 DBNLQ9UJU6 430 aaKnown RBP8.29□□□□□ -1.08
CLCN3-206ENST00000507875 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 FAM221AA4D161 298 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 AKAP10O43572 662 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 ALDH1B1P30837 517 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 DDR1Q08345 913 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 ZYXQ15942 572 aaKnown RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 CT47A1Q5JQC4 288 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 KIAA0319Q5VV43 1072 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 YOD1Q5VVQ6 348 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 RHBDD1Q8TEB9 315 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 TPX2Q9ULW0 747 aaKnown RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 CHD4Q14839 1912 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 ADCY3O60266 1144 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 NPR1P16066 1061 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 DHX8Q14562 1220 aaKnown RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 COL13A1Q5TAT6 717 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 TARS2Q9BW92 718 aaKnown RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 RTFDC1Q9BY42 306 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-206ENST00000507875 ZFAND3Q9H8U3 227 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 TMEM51Q9NW97 253 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 COMMD10Q9Y6G5 202 aa8.28□□□□□ -1.08
CLCN3-206ENST00000507875 CACNA1SQ13698 1873 aa8.27□□□□□ -1.08
CLCN3-206ENST00000507875 C10orf71Q711Q0 1435 aa8.27□□□□□ -1.08
CLCN3-206ENST00000507875 BPNT1O95861 308 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.09
CLCN3-206ENST00000507875 CHMLP26374 656 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 TARSP26639 723 aaKnown RBP8.27□□□□□ -1.09
CLCN3-206ENST00000507875 CHRNDQ07001 517 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 FXNQ16595 210 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 TTC39AQ5SRH9 613 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 STYK1Q6J9G0 422 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 ZSCAN25Q6NSZ9 544 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 PPP4R4Q6NUP7 873 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 AMOTL1Q8IY63 956 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 SNX21Q969T3 373 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 MFSD3Q96ES6 412 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 NEUROD6Q96NK8 337 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 DBNDD2Q9BQY9 259 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.09
CLCN3-206ENST00000507875 UTRNP46939 3433 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 GOLIM4O00461 696 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 PTPN5P54829 565 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 HSCBQ8IWL3 235 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 NINJ1Q92982 152 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 LIN7BQ9HAP6 207 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 SFMBT1Q9UHJ3 866 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
CLCN3-206ENST00000507875 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
CLCN3-206ENST00000507875 GOLGB1Q14789 3259 aaKnown RBP8.26□□□□□ -1.09
CLCN3-206ENST00000507875 CDK8P49336 464 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 PTPN11Q06124 597 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-206ENST00000507875 TTC8Q8TAM2 541 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 KIF2CQ99661 725 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 ZCCHC2Q9C0B9 1178 aaKnown RBP8.26□□□□□ -1.09
CLCN3-206ENST00000507875 PIM2Q9P1W9 311 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 XDHP47989 1333 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 SASH3O75995 380 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 LIG1P18858 919 aa8.26□□□□□ -1.09
CLCN3-206ENST00000507875 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.26□□□□□ -1.09
CLCN3-206ENST00000507875 SP8Q8IXZ3 490 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms